GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 04:31:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lutra lutra genome assembly, chromosome: 10.
LR738412.1:6102658-6102675
CTTCTGACTAGCCTGCTTGTCTTCCTCCTC6102658TCATCTTTCTCGCCTGCCCCGTCAACCCAGTTTATTCTTAGTGTCGTA
Erpetoichthys calabaricus genome assembly, chromosome: 13.
LR536444.2:119926732-119926749
TGGCACTCATTAGATGCCGATAAGAATTTT119926732TCATCTTTCTCGCCTGCCAGCGAGCTGCATACCATTAGCACCTGTAGC
Valencia hispanica genome assembly, chromosome: 3.
OY747702.1:23758825-23758842
CACCTTGACCCATTCTCCATCCTTCTCTCT23758825TCATCTTTCTCGCCTGCCTCTCATGTTACCTGATTGACCTTTCGCTCT
Rattus norvegicus clone CH230-122O4, WORKING DRAFT SEQUENCE, 4 ordered pieces.
AC111376.5:91671-91688
ACTGGAGTATTTCCAAATTTCGTTATTTCT91671TCATCTTTCTCGCCTGCCTTCTCGTCCCTTTTCCCACCCTGCCCTCTC
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141922.1:11275002-11275019
GATAAGGTGATTGCTTCTCGTCCATCTCTC11275002TCATCTTTCTCGCCTGCCAATCAAGGTTGATGAGCAGAGAGAGAGAGA
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141939.1:11735946-11735963
GATAAGTTGATTGCTTCTCGTCCATCTCTC11735946TCATCTTTCTCGCCTGCCAAGGTTGACGAGCAAAAAGAGAGAGAGGGA
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143370.1:12023398-12023415
GATAAGTTGATTGCTTCTCGTCCATCTCTC12023398TCATCTTTCTCGCCTGCCAAGGTTGACGAGCAAAAAGAGAGAGAGAGA
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143370.1:12079976-12079993
GATAAGGTGATTGCTTCTCGTCCATCTCTC12079976TCATCTTTCTCGCCTGCCAATCAAGGTTGATGAGAGAGAGAGAGAGAG
Triticum aestivum genome assembly, chromosome: 4B.
LR862518.1:19283732-19283749
ATAAAAAATTATAGATATGTTGGAGACGTA19283732TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Triticum aestivum genome assembly, chromosome: 4B.
LR862539.1:17745239-17745256
ATAAAAAATTATAGATATGTTGGAGACGTA17745239TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Triticum aestivum genome assembly, chromosome: 4B.
LR862560.1:18598757-18598774
ATAAAAAATTATAGATATGTTGGAGACGTA18598757TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Triticum aestivum genome assembly, chromosome: 4B.
LR865489.1:18417899-18417916
ATAAAAAATTATAGATACGTTGGAGACGTA18417899TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Triticum aestivum genome assembly, chromosome: 4B.
LR865510.1:17881338-17881355
ATAAAAAATTATAGATATGTTGGAGACGTA17881338TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Triticum aestivum genome assembly, chromosome: 4B.
LR865749.1:18038333-18038350
ATAAAAAATTATAGATATGTTGGAGACGTA18038333TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Triticum aestivum genome assembly, chromosome: 4B.
LR878445.1:18591202-18591219
ATAAAAAATTATAGATATGTTGGAGACGTA18591202TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Triticum aestivum genome assembly, chromosome: 4B.
LS992090.1:18079890-18079907
ATAAAAAATTATAGATATGTTGGAGACGTA18079890TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Triticum aestivum genome assembly, chromosome: 4B.
OU015731.1:20710886-20710903
ATAAAAAATTATAGATATGTTGGAGACGTA20710886TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Triticum aestivum genome assembly, chromosome: 4B.
OU343179.1:19927519-19927536
ATAAAAAATTATAGATACGTTGGAGACGTA19927519TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Malus sylvestris genome assembly, chromosome: 13.
OU696515.1:11651849-11651866
GATAAGTTGATTGCTTCTCGTCCATCTCTC11651849TCATCTTTCTCGCCTGCCAAGGTTGACGAGCAAAAAGAGAGAGAGAGA
Malus sylvestris genome assembly, chromosome: 13.
OU696515.1:11709926-11709943
GATAAGGTGATTGCTTCTCGTCCATCTCTC11709926TCATCTTTCTCGCCTGCCAATCAAGGTTGATGAGAGAGAGAGAGAGAG
Malus domestica genome assembly, chromosome: 13.
OU696689.1:11987697-11987714
GATAAGTTGATTGCTTCTCGTCCATCTCTC11987697TCATCTTTCTCGCCTGCCAAGGTTGACGAGCAAAAAAAGAGAGAGAGA
Malus domestica genome assembly, chromosome: 13.
OU696689.1:12055339-12055356
GATAAGGTGATTGCTTCTCGTCCATCTCTC12055339TCATCTTTCTCGCCTGCCAATCAAGGTTGATGAGAGAGAGAGAGAGAG
Malus domestica genome assembly, chromosome: 13.
OU744554.1:11917285-11917302
GATAAGTTGATTGCTTCTCGTCCATCTCTC11917285TCATCTTTCTCGCCTGCCAAGGTTGACGAGCAAAAAGAGAGAGAGGGA
Malus domestica genome assembly, chromosome: 13.
OU744965.1:11903322-11903339
GATAAGTTGATTGCTTCTCGTCCATCTCTC11903322TCATCTTTCTCGCCTGCCAAGGTTGACGAGCAAAAAGAGAGAGAGGGA
Malus domestica genome assembly, chromosome: 13.
OU745003.1:11734749-11734766
GATAAGTTGATTGCTTCTCGTCCATCTCTC11734749TCATCTTTCTCGCCTGCCAAGGTTGACGAGCAAAAAGAGAGAGAGGGA
Triticum aestivum genome assembly, chromosome: 4B.
OU963882.1:14077051-14077068
ATAAAAAATTATAGATATGTTGGAGACGTA14077051TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Triticum aestivum genome assembly, chromosome: 4B.
OV100747.1:18189972-18189989
ATAAAAAATTATAGATATGTTGGAGACGTA18189972TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Triticum aestivum genome assembly, chromosome: 4B.
OW530320.1:18189972-18189989
ATAAAAAATTATAGATATGTTGGAGACGTA18189972TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Triticum aestivum genome assembly, chromosome: 4B.
OX637235.1:13072209-13072226
ATAAAAAATTATAGATATGTTGGAGACGTA13072209TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Malus x robusta genome assembly, chromosome: 9.
OY720333.1:11620403-11620420
GATAAGTTGATTGCTTCTCGTCCATCTCTC11620403TCATCTTTCTCGCCTGCCAAGGTTGACGAACAAAAAGAGAGAGAGAGA
Malus x robusta genome assembly, chromosome: 9.
OY720333.1:11662057-11662074
GATAAGGTGATTGCTTCTCGTCCATCTCTC11662057TCATCTTTCTCGCCTGCCAATCAAGGTTGATGAGAGAGAGAGAGAGAG
Humulus lupulus genome assembly, chromosome: 7.
OY720654.1:99961706-99961723
AATCAGGAAAAAACTTCTCCTAGAACCTTG99961706TCATCTTTCTCGCCTGCCCCTCATCTTCAATCCTTTTCCCCAGAAGCT
Triticum timopheevii genome assembly, chromosome: 4G.
OY997268.1:59583799-59583816
ATAAAAAATTATAGATACGTTGGAGACGTA59583799TCATCTTTCTCGCCTGCCCGGCGTTCACCTCGCATCTTCTTCACCCGA
Macaria notata genome assembly, chromosome: 26.
OV656750.1:8929492-8929509
GCCTTAAACCCAACCGTTGGCAAAACTTTG8929492TCATCTTTCTCGCCTGCCAAATTATTCACCGTTTGAGTTTTTCCCGCG
Xiphydria camelus genome assembly, chromosome: 1.
OY783191.1:586443-586460
GCCGAAACGAGTGCGCGAGGAGAGGCGACG586443TCATCTTTCTCGCCTGCCAAATAAAGTCCCTCGCACCCCGTCATTTCG
Cepaea hortensis genome assembly, chromosome: 13.
OY992888.1:24124496-24124513
TGTCTCCTGCAACTCTTACGCAATTATGCG24124496TCATCTTTCTCGCCTGCCTTTACGCAAAATAATCACTATAAGATCGTG
Apodemus sylvaticus genome assembly, chromosome: 3.
OX359299.1:144867168-144867185
TGTGTCTCTGTGTCTGTGAAGGAACGAGAA144867168GGCAGGCGAGAAAGATGAAGAGTCAAAGGCAGACTGGGAAGGGCTGGG
Onychomys leucogaster genome assembly, chromosome: 11.
OX460381.1:61789578-61789595
CCTCCTCGGCCACAAACAGAGTGGCTGCCA61789578GGCAGGCGAGAAAGATGAGGGTGAGGAGGCCGAAGAGGCATTCTTCCT
Onychomys leucogaster genome assembly, chromosome: 11.
OX460428.1:62027636-62027653
CCTCCTCGGCCACAAACAGAGTGGCTGCCA62027636GGCAGGCGAGAAAGATGAGGGTGAGGAGGCCGAAGAGGCATTCTTCCT
Candidatus Latescibacteria bacterium isolate d54d2296-71c2-45af-80d9-7212e301404d genome assembly, chromosome: 47.
OY760034.1:17736-17753
TCTGCCTCTTCAGCCTCGGCGTCCGTGACA17736GGCAGGCGAGAAAGATGATACGATCACTGTACCCTTCATACAGTCGCA
Mdfw2058n13.y1 Mdfw Malus domestica cDNA clone Mdfw2058n13 5', mRNA sequence.
CO052635.1:41-58
CTCTCTCTCTCTCTCTCATCAACCTTGATT41GGCAGGCGAGAAAGATGAGAGAGATGGACGAGAAGCAATCACCTTATC
Linum usitatissimum chromosome Lu8.
CP027632.1:10216393-10216410
ATACCTCGCTGATTAGGAATTAGAATGCAT10216393GGCAGGCGAGAAAGATGAAGAAGAAGTTGGATTATTGGGAATCATGCA
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141965.1:29457666-29457683
TCTCTCTCTCTCTGCTCATCAACCTTGATT29457666GGCAGGCGAGAAAGATGAGAGAGATGGACGAGAAGCAATCACCTTATC
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141982.1:30235773-30235790
TCTCTCTCTCTCTGCTCATCAACCTTGATT30235773GGCAGGCGAGAAAGATGAGAGAGATGGACGAGAAGCAATCACCTTATC
Triticum aestivum genome assembly, chromosome: 4D.
LR862519.1:85318216-85318233
TCCCTTGGATCTGCAACATTAAGAAAGTAA85318216GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4D.
LR862540.1:84737506-84737523
TCCCTTGGATCTGCAACATTAAGAAAGTAA84737506GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4D.
LR862561.1:84945618-84945635
TCCCTTGGATCTGCAACATTAAGAAAGTAA84945618GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4B.
LR865468.1:19168217-19168234
TCGGGTGAAGAAGATGCGAGGTGAACGCCG19168217GGCAGGCGAGAAAGATGATACGTCTCCAACGTATCTATAATTTTTTAT
Triticum aestivum genome assembly, chromosome: 4D.
LR865469.1:84572112-84572129
TCCCTTGGATCTGCAACATTAAGAAAGTAA84572112GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4D.
LR865490.1:82414515-82414532
TCCCTTGGATCTGCAACATTAAGAAAGTAA82414515GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4D.
LR865511.1:85001485-85001502
TCCCTTGGATCTGCAACATTAAGAAAGTAA85001485GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4D.
LR865750.1:85815623-85815640
TCCCTTGGATCTGCAACATTAAGAAAGTAA85815623GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4B.
LR865770.1:14895839-14895856
TCGGGTGAAGAAGATGCGAGGTGAACGCCG14895839GGCAGGCGAGAAAGATGATACGTCTCCAACATATCTATAATTTTTTAT
Triticum aestivum genome assembly, chromosome: 4D.
LR865771.1:84864450-84864467
TCCCTTGGATCTGCAACATTAAGAAAGTAA84864450GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4B.
LR877319.1:17082757-17082774
TCGGGTGAAGAAGATGCGAGGTGAACGCCG17082757GGCAGGCGAGAAAGATGATACGTCTCCAACATATCTATAATTTTTTAT
Triticum aestivum genome assembly, chromosome: 4D.
LR877320.1:85094410-85094427
TCCCTTGGATCTGCAACATTAAGAAAGTAA85094410GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4D.
LR878446.1:84914879-84914896
TCCCTTGGATCTGCAACATTAAGAAAGTAA84914879GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4D.
LS992091.1:84286269-84286286
TCCCTTGGATCTGCAACATTAAGAAAGTAA84286269GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum turgidum subsp. durum genome assembly, chromosome: 4B.
LT934118.1:18158980-18158997
TCGGGTGAAGAAGATGCGAGGTGAACGCCG18158980GGCAGGCGAGAAAGATGATACGTCTCCAACATATCTATAATTTTTTAT
Triticum aestivum genome assembly, chromosome: 4D.
OU015732.1:86370963-86370980
TCCCTTGGATCTGCAACATTAAGAAAGTAA86370963GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4D.
OU343186.1:86935991-86936008
TCCCTTGGATCTGCAACATTAAGAAAGTAA86935991GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4D.
OU963883.1:85462086-85462103
TCCCTTGGATCTGCAACATTAAGAAAGTAA85462086GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum aestivum genome assembly, chromosome: 4D.
OX637236.1:61960243-61960260
TCCCTTGGATCTGCAACATTAAGAAAGTAA61960243GGCAGGCGAGAAAGATGATAAAAGGAACAAAACAAAGGAGAGAAAAAA
Triticum monococcum genome assembly, chromosome: 6A.
OY737855.1:535338754-535338771
CGGATCCTATTTATAATGAAAGGGGCGATA535338754GGCAGGCGAGAAAGATGAAGAGGCCAACATGATGTTTATCTAGCTAAT
Triticum monococcum genome assembly, chromosome: 6A.
OY737863.1:530677797-530677814
CGGATCCTATTTATAATGAAAGGGGCGATA530677797GGCAGGCGAGAAAGATGAAGAGGCCAACATGATGTTTATCTAGCTAAT
Brevibacillus borstelensis strain CP19 chromosome, complete genome.
CP144922.1:1226869-1226886
GGGTCCGATATGGGGAGGAAATGCTGGCCC1226869GGCAGGCGAGAAAGATGAAACGGACAGAGAGGATCACCAGAGTAATGA
Capitulum mitella isolate CP1-10 chromosome 13.
CP099851.1:12155367-12155384
CGTTTGTATTCCTGAGTATGGCACAAGCCC12155367GGCAGGCGAGAAAGATGAAAACCAAATGAAATGATTGCTGATGCATAT
Ectemnius continuus genome assembly, chromosome: 5.
OU342860.1:6088729-6088746
GCCTGTCTTTCTCAGCGCGAATTTTGTGGC6088729GGCAGGCGAGAAAGATGATAGATCGGGGTGATAGATAGAAAGGGCGAA
Andrena haemorrhoa genome assembly, chromosome: 6.
OU342945.1:29672853-29672870
CCCCGCGACGCAGCATTCGGAGATTCCGAA29672853GGCAGGCGAGAAAGATGAAAGAGACAGCCGAGAGAAGTGGCGGGAAAT
Alitta virens genome assembly, chromosome: 1.
OW028573.1:44617852-44617869
TGCACCTGCAGTCCCGCCACAGAATGAGGA44617852GGCAGGCGAGAAAGATGAGAGAACGGAAGATGACATTGGCACTCGTGC
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: I.
OX377205.1:18001993-18002010
TCCTATCGAGGCATGGCTGCACGAGACCGC18001993GGCAGGCGAGAAAGATGATGATGTCATCGAAATATTATATATTTTCGA
Conops quadrifasciatus genome assembly, chromosome: 2.
OX457078.1:34086923-34086940
TCGAATGAAAAAAAAAGTCATAGTGAAAGC34086923GGCAGGCGAGAAAGATGAAGAAGAAGAAAAAGAAGGCAATAGATTTTG
Malthinus flaveolus genome assembly, chromosome: 3.
OX467287.1:29880612-29880629
TAGCGAAACGTTCTGCCGAAACAGAACTCA29880612GGCAGGCGAGAAAGATGAGGTTTGGCTCTTTTTCAGTAGGTGCCTACC
Octopus vulgaris genome assembly, chromosome: 1.
OX597814.1:112500044-112500061
CAGGATGTCGAGGTGAATGGTGATAATGTA112500044GGCAGGCGAGAAAGATGAAAGACTCGGCCGAGAGAGACAGAGAAGATG
Tipula vernalis genome assembly, chromosome: 1.
OY282558.1:235312628-235312645
GACCGCACGATGTGTCTTGCTTGAGTAGTA235312628GGCAGGCGAGAAAGATGAATTATGCACGTATCCAAAGGAATTTAAAGC
Tipula vernalis genome assembly, chromosome: 1.
OY282558.1:368388195-368388212
GACCGCACGACTTTGCTTGCTTGAGTAGTA368388195GGCAGGCGAGAAAGATGAATTATACACGTGCCTAAAGGAATTTTAAGC
Nycteola revayana genome assembly, chromosome: 25.
OY855748.1:921381-921398
TTAATAAACATTTCTCATTCCAGCATTGGC921381GGCAGGCGAGAAAGATGACTCAATGCCGCCAGACGCGGCAAAACGTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/tcatctttctcgcctgcc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : tcatctttctcgcctgcc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.380 | 0.371 | search_plus_done; http://172.18.8.135:50400/match?q=TCATCTTTCTCGCCTGCC&k=0&no_gap=0&offset=0&limit=50
0.621 | 0.241 | search_minus_done; http://172.18.8.135:50400/match?q=GGCAGGCGAGAAAGATGA&k=0&no_gap=0&offset=0&limit=14
0.647 | 0.026 | cgi_end;

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