GGGenome | Results

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2025-03-21 20:32:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Medicago truncatula clone mth2-9i24, complete sequence.
AC126785.11:5594-5616

GGCAAACTAATTAAACCTCTGATTAGTCTT5594TCCTATGCAATTATGTGTGACCACTTAACAACAAACAATGAATAATGCTTAAT

Medicago truncatula chromosome 5 clone mth2-18j8, COMPLETE SEQUENCE.
CR962138.3:89254-89276

GGCAAACTAATTAAACCTCTGATTAGTCTT89254TCCTATGCAATTATGTGTGACCACTTAACAACAAACAATGAATAATGCTTAAT

T135792b shotgun sub-library of BAC clone 60O16 Medicago truncatula genomic clone 60-O-16-C-024, genomic survey sequence.
AQ580192.1:62-84

ATTAAGCATTATTCATTGTTTGTTGTTAAG62TGGTCACACATAATTGCATAGGAAAGACTAATCAGAGGTTTAATTAGTTTGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.128 | 0.119 | search_plus_done; http://172.18.8.135:50400/match?q=TCCTATGCAATTATGTGTGACCA&k=0&no_gap=0&offset=0&limit=50
0.157 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTCACACATAATTGCATAGGA&k=0&no_gap=0&offset=0&limit=48
0.158 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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