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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:50:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0544E20, *** SEQUENCING IN PROGRESS ***, 48 unordered pieces.
AC262202.1:71103-71123
ACGTGAAGAATGCATTTCTTCACGGCGATC71103TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0581G21, *** SEQUENCING IN PROGRESS ***, 27 unordered pieces.
AC263833.1:29908-29928
ACGTGAAGAATGCATTTCTTCACGGCGATC29908TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0377P22, *** SEQUENCING IN PROGRESS ***, 39 unordered pieces.
AC267438.1:2047-2067
ATGTGAAGAATGCATTTCTTCACGGCGATC2047TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR722621.1:567132268-567132288
ACGTGAAGAATGCATTTCTTCACGGCGATC567132268TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR812975.1:567132268-567132288
ACGTGAAGAATGCATTTCTTCACGGCGATC567132268TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR824635.1:601018873-601018893
ACGTGAAGAATGCATTTCTTCACGGCGATC601018873TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828089.1:613638445-613638465
ACGTGAAGAATGCATTTCTTCACGGCGATC613638445TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828097.1:586071886-586071906
ACGTGAAGAATGCATTTCTTCACGGCGATC586071886TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828113.1:551260240-551260260
ACGTGAAGAATGCATTTCTTCACGGCGATC551260240TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828151.2:553369994-553370014
ACGTGAAGAATGCATTTCTTCACGACGATC553369994TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828172.1:555828134-555828154
ACGTGAAGAATGCATTTCTTCACGGCGATC555828134TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
LR828191.1:605165606-605165626
ACGTGAAGAATGCATTTCTTCACGGCGATC605165606TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR865400.1:540548732-540548752
ACGTGAAGAATGCATTTCTTCACGGCGATC540548732TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR890101.1:555946831-555946851
ACGTGAAGAATGCATTTCTTCACGGCGATC555946831TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OU015685.1:518477765-518477785
ACGTGAAGAATGCATTTCTTCACGGCGATC518477765TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OU015686.1:560085801-560085821
ACGTGAAGAATGCATTTCTTCACGGCGATC560085801TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 1H.
OU015701.1:517538612-517538632
ACGTGAAGAATGCATTTCTTCACGGCGATC517538612TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 6H.
OX459914.1:553693187-553693207
ACGTGAAGAATGCATTTCTTCACGGCGATC553693187TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX459972.1:618123760-618123780
ACGTGAAGAATGCATTTCTTCACGGCGATC618123760TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 4H.
OX459980.1:583242983-583243003
ACGTGAAGAATGCATTTCTTCACGGCGATC583242983TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 6H.
OX459989.1:546308410-546308430
ACGTGAAGAATGCATTTCTTCACGGCGATC546308410TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 1H.
OX459991.1:501636364-501636384
ACGTGAAGAATGCATTTCTTCACGGCGATC501636364TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460024.1:568827178-568827198
ACGTGAAGAATGCATTTCTTCACGGCGATC568827178TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460042.1:524228811-524228831
ACGTGAAGAATGCATTTCTTCACGGCGATC524228811TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX460043.1:23260268-23260288
ACGTGAAGAATGCATTTCTTCACGGCGATC23260268TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460065.1:547807725-547807745
ACGTGAAGAATGCATTTCTTCACGGCGATC547807725TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460073.1:573158695-573158715
ACGTGAAGAATGCATTTCTTCACGGCGATC573158695TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460084.1:597024896-597024916
ACGTGAAGAATGCATTTCTTCACGGCGATC597024896TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460087.1:32929082-32929102
ACGTGAAGAATGCATTTCTTCACGGCGATC32929082TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460100.1:546427331-546427351
ACGTGAAGAATGCATTTCTTCACGACGATC546427331TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460122.1:546430906-546430926
ACGTGAAGAATGCATTTCTTCACGGCGATC546430906TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 7H.
OX460137.1:91063362-91063382
ACGTGAAGAATGCATTTCTTCACGGCGATC91063362TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 4H.
OX460141.1:588776373-588776393
ACGTGAAGAATGCATTTCTTCACGGCGATC588776373TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460150.1:544291727-544291747
ACGTGAAGAATGCATTTCTTCACGGCGATC544291727TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460157.1:548931907-548931927
ACGTGAAGAATGCATTTCTTCACGGCGATC548931907TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 2H.
OX460188.1:617273791-617273811
ACGTGAAGAATGCATTTCTTCACGGCGATC617273791TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 4H.
OX460197.1:586252804-586252824
ACGTGAAGAATGCATTTCTTCACGGCGATC586252804TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460234.1:557689838-557689858
ACGTGAAGAATGCATTTCTTCACGGCGATC557689838TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460283.1:550802466-550802486
ACGTGAAGAATGCATTTCTTCACGGCGATC550802466TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460290.1:550025689-550025709
ACGTGAAGAATGCATTTCTTCACGGCGATC550025689TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 4H.
OX460302.1:586155096-586155116
ACGTGAAGAATGCATTTCTTCACGGCGATC586155096TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX590745.1:579796386-579796406
ACGTGAAGAATGCATTTCTTCACGGCGATC579796386TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare f. agriocrithon genome assembly, chromosome: 6H.
OX590760.1:549670631-549670651
ACGTGAAGAATGCATTTCTTCACGGCGATC549670631TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX590764.1:610355406-610355426
ACGTGAAGAATGCATTTCTTCACGGCGATC610355406TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genome assembly, chromosome: 4H.
OX638752.1:586038462-586038482
ACGTGAAGAATGCATTTCTTCACGGCGATC586038462TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 1H.
OX638770.1:503576881-503576901
ACGTGAAGAATGCATTTCTTCACGGCGATC503576881TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638771.1:615301176-615301196
ACGTGAAGAATGCATTTCTTCACGGCGATC615301176TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638778.1:614571637-614571657
ACGTGAAGAATGCATTTCTTCACGGCGATC614571637TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638817.1:550460405-550460425
ACGTGAAGAATGCATTTCTTCACGGCGATC550460405TCTCCGAGCGTGTCTACTGTCAGCAGCCAGCTGGGTTCGTCGACGCCGCAC
Hordeum vulgare genomic DNA fragment; clone MWG0911.
AJ234641.1:303-323
GTGCGGCGTCGACGAACCCAGCTGGCTGCT303GACAGTAGACACGCTCGGAGAGATCGCCGTGAAGAAATGCATTCTTCACGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828091.1:508535903-508535923
GTGCGGCGTCGACGAACCCAGCTGGCTGCT508535903GACAGTAGACACGCTCGGAGAGATCGCCGTGAAGAAATGCATTCTTCACGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR890100.1:501323498-501323518
GTGCGGCGTCGACGAACCCAGCTGGCTGCT501323498GACAGTAGACACGCTCGGAGAGATCGCCGTGAAGAAATGCATTCTTCACGT
Hordeum vulgare genome assembly, chromosome: 5H.
OU701467.1:456924771-456924791
ATGCGGCGTCGACGAACCCAGCTGGCTGCT456924771GACAGTAGACACGCTCGGAGAGATCGCCGTGAAGAAATGCATTCTTCACGT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OX459906.1:511437802-511437822
GTGCGGCGTCGATGAACCCAGCTGGCTGCT511437802GACAGTAGACACGCTCGGAGAGATCGCCGTGAATAAATGCATTCTTCATGT
Hordeum vulgare genome assembly, chromosome: 7H.
OX460123.1:85692442-85692462
GTGCGGCATCGACGAACCCAGCTGGCTGCT85692442GACAGTAGACACGCTCGGAGAGATCGCCGTGAAGAAATGCATTCTTCACGT
Hordeum vulgare genome assembly, chromosome: 5H.
OX638657.1:505069552-505069572
ATGCGGCGTCGACGAACCCAGCTGGCTGCT505069552GACAGTAGACACGCTCGGAGAGATCGCCGTGAAGAAATGCATTCTTCACGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tctccgagcgtgtctactgtc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tctccgagcgtgtctactgtc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.220 | 0.211 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCCGAGCGTGTCTACTGTC&k=0&no_gap=0&offset=0&limit=50
0.365 | 0.144 | search_minus_done; http://172.18.8.135:50400/match?q=GACAGTAGACACGCTCGGAGA&k=0&no_gap=0&offset=0&limit=1
0.369 | 0.005 | cgi_end;

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