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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:47:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Ipomoea nil mRNA, clone: JMFS008F08, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY936490.1:88-111
GAGTTGGGATGATACCGGCAGGGTCCCGGA88AGATGGTGGAGAGCTTGAAGGAGATAGTGAGCAACTATTCCGATTATGAGATCT
Ipomoea nil mRNA, clone: JMFS037D07, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY938754.1:87-110
GAGTTGGGATGATACCGGCAGGGTCCCGGA87AGATGGTGGAGAGCTTGAAGGAGATAGTGAGCAACTATTCCGATTATGAGATCT
Ipomoea nil mRNA, clone: JMFS148C05, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY947362.1:181-204
GAGTTGGGATGATACCGGCAGGGTCCCGGA181AGATGGTGGAGAGCTTGAAGGAGATAGTGAGCAACTATTCCGATTATGAGATCT
TSA: Ipomoea batatas Contig_16801.Ipbalsr mRNA sequence.
JP121389.1:372-395
GAGTTGGGATGATACCGGCAGGGTCCCGGA372AGATGGTGGAGAGCTTGAAGGAGATAGTGAGCAACTATTCCGATTCTGAGATCT
Ipomoea trifida cultivar NCNSP0306 chromosome 1.
CP025644.1:4714794-4714817
GAGTTGGGATGATACCGGCAGGGTCCCGGA4714794AGATGGTGGAGAGCTTGAAGGAGATAGTGAGCAACTATTCCGATTCTGAGATCT
Ipomoea triloba cultivar NCNSP0323 chromosome 1.
CP025660.1:5384131-5384154
GAGTTGGGATGATACCGGCAGGGTCCCGGA5384131AGATGGTGGAGAGCTTGAAGGAGATAGTGAGCAACTATTCCGATTCTGAGATCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tctccttcaagctctccaccatct
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tctccttcaagctctccaccatct | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.153 | 0.144 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCCTTCAAGCTCTCCACCATCT&k=0&no_gap=0&offset=0&limit=50
0.516 | 0.363 | search_minus_done; http://172.18.8.135:50400/match?q=AGATGGTGGAGAGCTTGAAGGAGA&k=0&no_gap=0&offset=0&limit=50
0.520 | 0.004 | cgi_end;

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