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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 16:28:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Populus euphratica EST, clone P0000300035A07F1.
AJ775652.1:287-310
GAGAGAGATGGAGGACTACAATCAAATGAG287TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus euphratica EST, clone P0000600001A12F1.
AJ778459.1:189-212
GAGAGAGATGGAGGACTACAATCAAATGAG189TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus euphratica EST, clone P0000600010B08F1.
AJ779031.1:362-385
GAGAGAGATGGAGGACTACAATCAAATGAG362TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
G121P61Y Populus cambium cDNA library Populus tremula x Populus tremuloides cDNA, mRNA sequence.
BI131489.1:335-358
GAGAGAGATGGAGGACTACAATCAAATGAG335TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
UA54DPH11 Populus tremula cambium cDNA library Populus tremula cDNA 5 prime, mRNA sequence.
BU820413.1:520-543
GAGAGAGATGGAGGACTACAATCAAATGAG520TGAAAACACGACTCCGAGGGGAAATNTCTTGTATGCTTCACAGCTTCTTGCACC
UB53CPB04 Populus tremula cambium cDNA library Populus tremula cDNA 5 prime, mRNA sequence.
BU823490.1:331-354
GAGAGAGATGGAGGACTACAATCAAATGAG331TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
PtaC0023A9A0901 Poplar cDNA library from cambial zone Populus tremula x Populus alba cDNA 5', mRNA sequence.
CF231575.1:167-190
GAGAGAGATGGAGGACTACAATCAAATGAG167TGAAAACACGACTCCGAGGGGAAATTTCTTGTNTNNTTTACAGCTNNNNGCACC
G121P61.5pR Populus tension wood cDNA library Populus tremula x Populus tremuloides cDNA clone G121P61 5', mRNA sequence.
CK103539.1:288-311
GAGAGAGATGGAGGACTACAATCAAATGAG288TGAAAACACGACTCCGAGGGGAAATTCTTGTATGCTTCACAGCTTCTTGCACCC
GQ0092.B3_O22 GQ009 Populus trichocarpa x Populus deltoides cDNA clone GQ0092_O22 5', mRNA sequence.
CN517513.1:107-130
GAGAGAGATGGAGGACTACAATCAAATGAG107TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
GQ0104.B3_M01 GQ010 Populus trichocarpa x Populus deltoides cDNA clone GQ0104_M01 5', mRNA sequence.
CN519152.1:334-357
GAGAGAGATGGAGGACTACAATCAAATGAG334TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCCTCACAACTTCTTGCACC
Populus nigra mRNA, clone: PnFL2-070_H21, 5'end.
DB887239.1:363-386
GAGAGAGATGGAGGACTACAATCAAATGAG363TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
T022A11.5pR Populus shoot meristem cDNA library Populus tremula x Populus tremuloides cDNA clone T022A11 5', mRNA sequence.
DN499060.1:367-390
GAGAGAGATGGAGGACTACAATCAAATGAG367TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
WS02424.BR_O24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus deltoides cDNA clone WS02424_O24 5', mRNA sequence.
DT509858.1:342-365
GAGAGAGATGGAGGACTACAATCAAATGAG342TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus trichocarpa clone Pop1-85E10, complete sequence.
AC182710.2:49973-49996
GAGAGAGATGGAGGACTACAATCAAATGAG49973TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa knotted-like homeobox protein mRNA, complete cds.
AY660748.1:262-285
GAGAGAGATGGAGGACTACAATCAAATGAG262TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus balsamifera subsp. trichocarpa x Populus deltoides homeobox transcription factor KN3 (Kn3) mRNA, complete cds.
AY684938.1:24-47
ATGGAGGACTACAATCAAATGAG24TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCCTCACAACTTCTTGCACC
Populus trichocarpa KNOX transcription factor (KNOX) mRNA, complete cds.
FJ807482.1:90-113
GAGAGAGATGGAGGACTACAATCAAATGAG90TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa knotted-like protein gene, complete cds.
JX986688.1:24-47
ATGGAGGACTACAATCAAATGAG24TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 01 KNAT1 gene, promoter region and complete cds.
KP058580.1:986-1009
GAGAGAGATGGAGGACTACAATCAAATGAG986TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus tomentosa genotype 02 KNAT1 gene, promoter region and complete cds.
KP058581.1:989-1012
GAGAGAGATGGAGGACTACAATCAAATGAG989TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 03 KNAT1 gene, promoter region and complete cds.
KP058582.1:989-1012
GAGAGAGATGGAGGACTACAATCAAATGAG989TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 04 KNAT1 gene, promoter region and complete cds.
KP058583.1:989-1012
GAGAGAGATGGAGGACTACAATCAAATGAG989TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 05 KNAT1 gene, promoter region and complete cds.
KP058584.1:989-1012
GAGAGAGATGGAGGACTACAATCAAATGAG989TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 06 KNAT1 gene, promoter region and complete cds.
KP058585.1:987-1010
GAGAGAGATGGAGGACTACAATCAAATGAG987TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus tomentosa genotype 07 KNAT1 gene, promoter region and complete cds.
KP058586.1:986-1009
GAGAGAGATGGAGGACTACAATCAAATGAG986TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 08 KNAT1 gene, promoter region and complete cds.
KP058587.1:989-1012
GAGAGAGATGGAGGACTACAATCAAATGAG989TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 09 KNAT1 gene, promoter region and complete cds.
KP058588.1:986-1009
GAGAGAGATGGAGGACTACAATCAAATGAG986TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus tomentosa genotype 10 KNAT1 gene, promoter region and complete cds.
KP058589.1:988-1011
GAGAGAGATGGAGGACTACAATCAAATGAG988TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 11 KNAT1 gene, promoter region and complete cds.
KP058590.1:1024-1047
GAGAGAGATGGAGGACTACAATCAAATGAG1024TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 12 KNAT1 gene, promoter region and complete cds.
KP058591.1:1021-1044
GAGAGAGATGGAGGACTACAATCAAATGAG1021TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus tomentosa genotype 13 KNAT1 gene, promoter region and complete cds.
KP058592.1:1023-1046
GAGAGAGATGGAGGACTACAATCAAATGAG1023TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 14 KNAT1 gene, promoter region and complete cds.
KP058593.1:1020-1043
GAGAGAGATGGAGGACTACAATCAAATGAG1020TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus tomentosa genotype 15 KNAT1 gene, promoter region and complete cds.
KP058594.1:990-1013
GAGAGAGATGGAGGACTACAATCAAATGAG990TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 16 KNAT1 gene, promoter region and complete cds.
KP058595.1:989-1012
GAGAGAGATGGAGGACTACAATCAAATGAG989TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 17 KNAT1 gene, promoter region and complete cds.
KP058596.1:989-1012
GAGAGAGATGGAGGACTACAATCAAATGAG989TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 18 KNAT1 gene, promoter region and complete cds.
KP058597.1:1021-1044
GAGAGAGATGGAGGACTACAATCAAATGAG1021TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 19 KNAT1 gene, promoter region and complete cds.
KP058598.1:1024-1047
GAGAGAGATGGAGGACTACAATCAAATGAG1024TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 20 KNAT1 gene, promoter region and complete cds.
KP058599.1:1018-1041
GAGAGAGATGGAGGACTACAATCAAATGAG1018TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus tomentosa genotype 21 KNAT1 gene, promoter region and complete cds.
KP058600.1:989-1012
GAGAGAGATGGAGGACTACAATCAAATGAG989TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 22 KNAT1 gene, promoter region and complete cds.
KP058601.1:1024-1047
GAGAGAGATGGAGGACTACAATCAAATGAG1024TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 23 KNAT1 gene, promoter region and complete cds.
KP058602.1:989-1012
GAGAGAGATGGAGGACTACAATCAAATGAG989TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 24 KNAT1 gene, promoter region and complete cds.
KP058603.1:1024-1047
GAGAGAGATGGAGGACTACAATCAAATGAG1024TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 25 KNAT1 gene, promoter region and complete cds.
KP058604.1:990-1013
GAGAGAGATGGAGGACTACAATCAAATGAG990TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa KNAT1 gene, promoter region and complete cds.
KP058605.1:1018-1041
GAGAGAGATGGAGGACTACAATCAAATGAG1018TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus tomentosa genotype 27 KNAT1 gene, promoter region and complete cds.
KP058606.1:991-1014
GAGAGAGATGGAGGACTACAATCAAATGAG991TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus tomentosa genotype 28 KNAT1 gene, promoter region and complete cds.
KP058607.1:1018-1041
GAGAGAGATGGAGGACTACAATCAAATGAG1018TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 29 KNAT1 gene, promoter region and complete cds.
KP058608.1:1021-1044
GGGAGAGATGGAGGACTACAATCAAATGAG1021TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 30 KNAT1 gene, promoter region and complete cds.
KP058609.1:1021-1044
GAGAGAGATGGAGGACTACAATCAGATGAG1021TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus tomentosa genotype 31 KNAT1 gene, promoter region and complete cds.
KP058610.1:989-1012
GAGAGAGATGGAGGACTACAATCAAATGAG989TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 32 KNAT1 gene, promoter region and complete cds.
KP058611.1:1024-1047
GAGAGAGATGGAGGACTACAATCAAATGAG1024TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 33 KNAT1 gene, promoter region and complete cds.
KP058612.1:1020-1043
GAGAGAGATGGAGGACTACAATCAAATGAG1020TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 34 KNAT1 gene, promoter region and complete cds.
KP058613.1:986-1009
GAGAGAGATGGAGGACTACAATCAAATGAG986TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 35 KNAT1 gene, promoter region and complete cds.
KP058614.1:1021-1044
GAGAGAGATGGAGGACTACAATCAAATGAG1021TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus tomentosa genotype 36 KNAT1 gene, promoter region and complete cds.
KP058615.1:992-1015
GAGAGAGATGGAGGACTACAATCAAATGAG992TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 37 KNAT1 gene, promoter region and complete cds.
KP058616.1:985-1008
GAGAGAGATGGAGGACTACAATCAAATGAG985TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 38 KNAT1 gene, promoter region and complete cds.
KP058617.1:1024-1047
GAGAGAGATGGAGGACTACAATCAAATGAG1024TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus tomentosa genotype 39 KNAT1 gene, promoter region and complete cds.
KP058618.1:1021-1044
GAGAGAGATGGAGGACTACAATCAAATGAG1021TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa genotype 40 KNAT1 gene, promoter region and complete cds.
KP058619.1:986-1009
GAGAGAGATGGAGGACTACAATCAAATGAG986TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus tomentosa KNAT1 mRNA, complete cds.
KP058660.1:639-662
GAGAGAGATGGAGGACTACAATCAAATGAG639TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC
Populus tomentosa kn1-like protein (Potom.002G113300) mRNA, complete cds.
MG204208.1:24-47
ATGGAGGACTACAATCAAATGAG24TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAGCTTCTTGCACC
Populus nigra genome assembly, chromosome: 4.
OX637675.1:8554025-8554048
GAGAGAGATGGAGGACTACAATCAAATGAG8554025TGAAAACACGACTCCGAGGGGAAATTTCTTGTATGCTTCACAACTTCTTGCACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tgaaaacacgactccgaggggaaa
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tgaaaacacgactccgaggggaaa | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.870 | 0.862 | search_plus_done; http://172.18.8.135:50400/match?q=TGAAAACACGACTCCGAGGGGAAA&k=0&no_gap=0&offset=0&limit=50
0.985 | 0.114 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCCCCTCGGAGTCGTGTTTTCA&k=0&no_gap=0&offset=0&limit=0
0.985 | 0.000 | cgi_end;

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