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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 19:08:31, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:26106833-26106852
TCGTGGTGGTATTTTTTGGCATTTGGATTT26106833TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:27103020-27103039
TCGTGGTGGTATTTTTTGGCATTTGGGTTT27103020TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:25067981-25068000
TCGTGGTGGTATTTTTTGGCATTTGGATTT25067981TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:25552542-25552561
TCGTGGTGGTATTTTTTGGCATTTGGATTT25552542TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:29166367-29166386
TTGTGGTGTTGTTTTTTGGTATTTGGGTTT29166367TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:26874552-26874571
TCGTGGTGGTATTTTTTGGCATTTGGGTTT26874552TGAAGGCAATCACTCTGTGCCCTAATGTTCCAGTTTATTGGACGAATCGC
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:27070667-27070686
TTGTGGTGTTGTTTTTTGGCATTTGGGTTT27070667TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:24651863-24651882
TCGTGGTGGTATTTTTTGGCATTTGGGTTT24651863TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus domestica cultivar Red Fuji chromosome 5.
CP147797.1:28598552-28598571
TTGTGGTGTTGTTTTTTGGTATTTGGGTTT28598552TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus domestica cultivar Red Fuji chromosome 5.
CP147822.1:28652483-28652502
TTGTGGTGTTGTTTTTTGGTATTTGGGTTT28652483TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus ioensis cultivar PI590015 chromosome 5.
CP154728.1:29257285-29257304
TTGTGGTGTTGTTTTTTGGCATTTGGGTTT29257285TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus ioensis cultivar PI590015 chromosome 10.
CP154733.1:23538041-23538060
TCGTGGTGGTATTTTTTGGCATTTGGGTTT23538041TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus ioensis cultivar PI590015 chromosome 5.
CP154745.1:30362733-30362752
TTGTGGTGTTGTTTTTTGGCATTTGGGTTT30362733TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus ioensis cultivar PI590015 chromosome 10.
CP154750.1:27640026-27640045
TCGTGGTGGTATTTTTTGGCATTTGGGTTT27640026TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus coronaria cultivar PI590014 chromosome 5.
CP154762.1:30947853-30947872
TTGTGGTGTTGTTTTTTGGCATTTGGGTTC30947853TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus coronaria cultivar PI590014 chromosome 10.
CP154767.1:28640107-28640126
TCGTGGTGGTATTTTTTGGCATTTGGGTTT28640107TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus coronaria cultivar PI590014 chromosome 10.
CP154784.1:28475384-28475403
TCGTGGTGGTATTTTTTGGCATTTGGGTTT28475384TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Chaenomeles sinensis isolate sampleA chromosome 01.
CP162364.1:21998339-21998358
TTGTGGTGGTATTTTTTGGCATTTGGGTTT21998339TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Chaenomeles sinensis isolate sampleA chromosome 02.
CP162365.1:24051717-24051736
TTGTGGTGTTGTTTTTTGGCATTTGGGTTT24051717TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus domestica cultivar WA 38 chromosome 5B.
CP165688.1:28361011-28361030
TTGTGGTGTTGTTTTTTGGTATTTGGGTTT28361011TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus domestica cultivar WA 38 chromosome 10B.
CP165693.1:26747362-26747381
TCGTGGTGGTATTTTTTGGTATTTGGGTTT26747362TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus domestica cultivar WA 38 chromosome 5A.
CP165705.1:28793395-28793414
TTGTGGTGTTGTTTTTTGGCATTTGGGTTT28793395TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus domestica cultivar WA 38 chromosome 10A.
CP165710.1:26145442-26145461
TCGTGGTGGTATTTTTTGGCATTTGGGTTT26145442TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus domestica cultivar Golden Delicious chromosome 05.
CP168769.1:28524019-28524038
TTGTGGTGTTGTTTTTTGGCATTTGGGTTT28524019TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus domestica cultivar Golden Delicious chromosome 10.
CP168774.1:26244726-26244745
TCGTGGTGGTATTTTTTGGTATTTGGGTTT26244726TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus domestica cultivar Golden Delicious chromosome 05.
CP168786.1:28619543-28619562
TTGTGGTGTTGTTTTTTGGCATTTGGGTTT28619543TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus domestica cultivar Golden Delicious chromosome 10.
CP168791.1:26426057-26426076
TCGTGGTGGTATTTTTTGGCATTTGGGTTT26426057TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:28951671-28951690
TTGTGGTGTTGTTTTTTGGCATTTGGGTTT28951671TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:26545011-26545030
TCGTGGTGGTATTTTTTGGCATTTGGGTTT26545011TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus domestica genome assembly, chromosome: 5.
OU696681.1:28219273-28219292
TTGTGGTGTTGTTTTTTGGCATTTGGGTTT28219273TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus domestica genome assembly, chromosome: 10.
OU696686.1:26659264-26659283
TCGTGGTGGTATTTTTTGGCATTTGGGTTT26659264TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus domestica genome assembly, chromosome: 5.
OU744546.1:28187930-28187949
TTGTGGTGTTGTTTTTTGGTATTTGGGTTT28187930TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus domestica genome assembly, chromosome: 10.
OU744551.1:26635517-26635536
TCGTGGTGGTATTTTTTGGCATTTGGGTTT26635517TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus domestica genome assembly, chromosome: 5.
OU744957.1:28346349-28346368
TTGTGGTGTTGTTTTTTGGCATTTGGGTTT28346349TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus domestica genome assembly, chromosome: 10.
OU744962.1:27502515-27502534
TCGTGGTGGTATTTTTTGGCATTTGGGTTT27502515TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus domestica genome assembly, chromosome: 5.
OU744995.1:29626755-29626774
TTGTGGTGTTGTTTTTTGGCATTTGGGTTT29626755TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTTTACGAATCGC
Malus domestica genome assembly, chromosome: 10.
OU745000.1:26456449-26456468
TCGTGGTGGTATTTTTTGGCATTTGGGTTT26456449TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:25150462-25150481
TCGTGGTGGTATTTTTTGGCATTTGGATTT25150462TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:25725095-25725114
TCGTGGTGGTATTTTTTGGCATTTGGGTTT25725095TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:17903448-17903467
TCGTGGTGTTATTTTTTGGCATTTGGGTTT17903448TGAAGGCAATCACTCTGTGCCCTAATGTTCCTGTTTATTGGACGAATCGC
Rubus caesius genome assembly, chromosome: 5.
OZ174134.1:30609496-30609515
TTCGATTAACAATTTCATTTGCATTGGGTT30609496TGAAGGCAATCACTCTGTGCCCTAAAGTTTCTGTTTTGTACACGAATCGT
Heterocladium heteropterum genome assembly, chromosome: 1.
OZ208698.1:22956093-22956112
CTTCCTGAATCACTCTGCATGAAACTGCAC22956093TGAAGGCAATCACTCTGTGCCTTATTTTGTGAGTAGGTCATCCCTACCAC
Apteryx australis mantelli genome assembly, scaffold: scaffold43.
LK064721.1:6030454-6030473
ATTCATAAGACACACCCTTAGCTTGTTTCC6030454TGAAGGCAATCACTCTGTGCCTATGACACTGTGGTTCTCCAATTCCTTTT
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:17088902-17088921
GCGATTCGTAAAATAAACAGGAACATTAGG17088902GCACAGAGTGATTGCCTTCAAAACCCAAATGCCAAAAAACAACACCACAA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:17685407-17685426
GCGATTCGTAAAATAAACAGGAACATTAGG17685407GCACAGAGTGATTGCCTTCAAAACCCAAATGCCAAAAAACAACACCACAA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:16938884-16938903
GCGATTCGTAAAATAAACAGGAACATTAGG16938884GCACAGAGTGATTGCCTTCAAAACCCAAATGCCAAAAAACAACACCACAA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:17969499-17969518
GCGATTCGTAAAATAAACAGGAACATTAGG17969499GCACAGAGTGATTGCCTTCAAAACCCAAATGCCAAAAAACAACACCACAA
Malus domestica cultivar Red Fuji chromosome 10.
CP147802.1:18269477-18269496
GCGATTCGTCCAATAAACTGGAACATTAGG18269477GCACAGAGTGATTGCCTTCAAAACCCAAATGCCAAAAAATACCACCACGA
Malus domestica cultivar Red Fuji chromosome 10.
CP147811.1:17451242-17451261
GCGATTCGTCCAATAAACAGGAACATTAGG17451242GCACAGAGTGATTGCCTTCAAAACCCAAATACCAAAAAATACCACCACGA
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:17472714-17472733
GCGATTCGTAAAATAAACAGGAACATTAGG17472714GCACAGAGTGATTGCCTTCAAAACCCAAATGCCAAAAAACAACACCACAA
Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:18514261-18514280
GCGATTCGTAAAATAAACAGGAACATTAGG18514261GCACAGAGTGATTGCCTTCAAAACCCAAATGCCAAAAAACGACACCACAA
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:13532808-13532827
GCGATTCGTAAAATAAACAGGAACATTAGG13532808GCACAGAGTGATTGCCTTCAAAACCCAAATGCCAAAAAACAACACCACAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tgaaggcaatcactctgtgc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tgaaggcaatcactctgtgc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.470 | 0.461 | search_plus_done; http://172.18.8.135:50800/match?q=TGAAGGCAATCACTCTGTGC&k=0&no_gap=0&offset=0&limit=50
0.627 | 0.157 | search_minus_done; http://172.18.8.135:50800/match?q=GCACAGAGTGATTGCCTTCA&k=0&no_gap=0&offset=0&limit=7
0.633 | 0.006 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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