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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 13:05:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Capsicum annuum MGMT_Contig33235 mRNA sequence.
JW083479.1:932-955
CTTGATACCAAAATCACCTGGAGAAGGTGG932TGAATCAGTAGGGGAACTAAAAGGAGGAGGAAATGTAGGGATCTGAATCTTCAA
TSA: Capsicum annuum EJVs_8204, mRNA sequence.
JW141050.1:359-382
CTTGATACCAAAATCACCTGGAGAAGGTGG359TGAATCAGTAGGGGAACTAAAAGGAGGAGGAAATGTAGGGATCTGAATCTTCAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:261865090-261865113
CTTGATACCAAAATCACCTGGAGAAGGTGG261865090TGAATCAGTAGGGGAACTAAAAGGAGGAGGAAATGTAGGGATCTGAATCTTCAA
EST0045 Habanero leaf cDNA Capsicum chinense cDNA clone Jn 31 similar to Unknown protein, mRNA sequence.
BI480592.1:284-307
TTGAAGATTCAGATCCCTACATTTCCTCCT284CCTTTTAGTTCCCCTACTGATTCACCACCTTCTCCAGGTGATTTTGGTATCAAG
KS14012D09 KS14 Capsicum annuum cDNA, mRNA sequence.
GD058548.1:147-170
TTGAAGATTCAGATCCCTACATTTCCTCCT147CCTTTTAGTTCCCCTACTGATTCACCACCTTCTCCAGGTGATTTTGGTATCAAG
KS21010N23 KS21 Capsicum annuum cDNA, mRNA sequence.
GD100158.1:409-432
TTGAAGATTCAGATCCCTACATTTCCTCCT409CCTTTTAGTTCCCCTACTGATTCACCACCTTCTCCAGGTGATTTTGGTATCAAG
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:30713809-30713832
TTGAAGATTCAGATCCCTACATTTCCTCCT30713809CCTTTTAGTTCCCCTACTGATTCACCACCTTCTCCAGGTGATTTTGGTATCAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tgaatcagtaggggaactaaaagg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tgaatcagtaggggaactaaaagg | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.225 | 0.217 | search_plus_done; http://172.18.8.135:50400/match?q=TGAATCAGTAGGGGAACTAAAAGG&k=0&no_gap=0&offset=0&limit=50
0.514 | 0.288 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTTTAGTTCCCCTACTGATTCA&k=0&no_gap=0&offset=0&limit=47
0.517 | 0.003 | cgi_end;

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