GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 16:00:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Onychomys torridus genome assembly, chromosome: 3.
LR877190.1:151151829-151151846
GTACTGGAGCAGCTGGTCACATTACATCCA151151829TGATCAAGAAGAAGGGAGACATGAATGCTCACACTCAGCTCCCTTTGT
Heterocephalus glaber genome assembly, chromosome: 20.
OX090928.1:48630966-48630983
TAGAGGACAGAGAGCGCCATCTGGGCTGAG48630966TGATCAAGAAGAAGGGAGGCGGGAGAACTGAAATAAAAAGGACCACTG
Heterocephalus glaber genome assembly, chromosome: 17.
OX090957.1:18117568-18117585
ATCATGCTAAGAATACTTTATCAAATAAAA18117568TGATCAAGAAGAAGGGAGGGCTGGGCAAGGGTGAAAAATAAGAACCAA
Heterocephalus glaber genome assembly, chromosome: 20.
OX090960.1:44726400-44726417
TAGAGGACAGAGAGCGCCATCTGGGCTGAG44726400TGATCAAGAAGAAGGGAGGCGGGAGAACTGAAATAAAAAGGACCACTG
Onychomys arenicola genome assembly, chromosome: 3.
OX460349.1:157234137-157234154
GTACTGAAGCAGCTGGTCACATTACATCCA157234137TGATCAAGAAGAAGGGAGACATGAATGCTCACACTCAGCTCTCTTTGT
Onychomys leucogaster genome assembly, chromosome: 3.
OX460373.1:156988230-156988247
GTACTGAAGCAGCTGGTCACATTACATCCA156988230TGATCAAGAAGAAGGGAGACATGAATGCTCACACTCAGCTCTCTTTGT
Onychomys leucogaster genome assembly, chromosome: 3.
OX460420.1:157771076-157771093
GTACTGAAGCAGCTGGTCACATTACATCCA157771076TGATCAAGAAGAAGGGAGACATGAATGCTCACACTCAGCTCTCTTTGT
Onychomys arenicola genome assembly, chromosome: 3.
OX460444.1:152989621-152989638
GTACTGAAGCAGCTGGTCACATTACATCCA152989621TGATCAAGAAGAAGGGAGACATGAATGCTCACACTCAGCTCTCTTTGT
Onychomys torridus genome assembly, chromosome: 3.
OX460884.1:151151829-151151846
GTACTGGAGCAGCTGGTCACATTACATCCA151151829TGATCAAGAAGAAGGGAGACATGAATGCTCACACTCAGCTCCCTTTGT
Heterocephalus glaber genome assembly, chromosome: 16.
OZ001081.1:70044672-70044689
ATCATGCTAAGAATACTTTATCAAATAAAA70044672TGATCAAGAAGAAGGGAGGGCTGGGCAAGGGTGAAAAATAAGAACCAA
Heterocephalus glaber genome assembly, chromosome: 16.
OZ001124.1:71942575-71942592
ATCATGCTAAGAATACTTTATCAAATAAAA71942575TGATCAAGAAGAAGGGAGGGCTGGGCAAGGGTGAAAAATAAGAACCAA
Sus scrofa scrofa breed NS chromosome 1.
CP071552.1:244162711-244162728
CATGGCCTGCGGGGTGAGAGGAAAAGAAAG244162711TGATCAAGAAGAAGGGAGCAATTGGTTAACTGTGTCAAGAGTTGCTAG
Sus scrofa scrofa breed NS chromosome 2.
CP071553.1:73858308-73858325
CCTCTCCCTGTCCCAGTGCTTCCAGATCAA73858308TGATCAAGAAGAAGGGAGAGGGTTGGACCAAGCTTACTGGGCATGAGG
Sarcophilus harrisii genome assembly, chromosome: 1.
LR735554.1:245825822-245825839
AATAACTACTTCTTGGAAAGCATAGCTCAG245825822TGATCAAGAAGAAGGGAGAATTGATTAAAGAAATGTCACAAACAAAAA
Eptesicus nilssonii genome assembly, chromosome: 9.
OX621288.1:30343653-30343670
CATGTGTGGAAATGACCATATGGTTAGGGA30343653TGATCAAGAAGAAGGGAGCTTATTGATAGACCAGTGGTTTTCAAAGTG
Pipistrellus nathusii genome assembly, chromosome: 16.
OY882873.1:29829761-29829778
ATGGGGTGAACCCAGAGATTATCTTCTGGG29829761TGATCAAGAAGAAGGGAGAGGGAAGGAGGAAGGAAAACACCCAGAGAA
Pipistrellus nathusii genome assembly, chromosome: 16.
OY883193.1:30078408-30078425
ACGGGGTGAACCCAGAGATTATCTTCTGGG30078408TGATCAAGAAGAAGGGAGAGGGAAGGAGGAAGGAAAACACCCAGAGAA
Sus scrofa genome assembly, chromosome: 1.
OY997208.1:252791349-252791366
CATGGCCTGCGGGGTGAGAGGAAAAGAAAG252791349TGATCAAGAAGAAGGGAGCAATTGGTTAACTGTGTCAAGAGTTGCTAG
Sus scrofa genome assembly, chromosome: 2.
OY997209.1:81399253-81399270
CCTCTCCCTGTCCCAGTGCTTCCAGATCAA81399253TGATCAAGAAGAAGGGAGAGGGTTGGACCAAGCTTACTGGGCATGAGG
Vespertilio murinus genome assembly, chromosome: 8.
OZ004712.1:61776708-61776725
GTTACCTGGTGGTTGTTGGTTAATTCTCGG61776708TGATCAAGAAGAAGGGAGGACGTGTTTTTTTTTGTTTTTTGTTTTGAA
Muntiacus reevesi genome assembly, chromosome: 8.
OZ005632.1:20225699-20225716
TAAAAAAATATGATAAACTTCTATGAGGAC20225699TGATCAAGAAGAAGGGAGAGATATAAGCTACAAATGACTATCAAGAAA
Myripristis murdjan genome assembly, chromosome: 3.
LR597552.1:38140176-38140193
TAATTAAACTGAGACAGCAGCTGTCTTGAG38140176TGATCAAGAAGAAGGGAGGGAGCTGTTTGTTAAACTGCTTCATTCTTC
Telmatherina bonti genome assembly, chromosome: 3.
OW121823.1:23145277-23145294
GAAAAGAAAAGCACAAAAGAGCTGATGAGC23145277TGATCAAGAAGAAGGGAGATAAAGCCACACATACAAGTCAGGACTGAT
Telmatherina bonti genome assembly, chromosome: 16.
OW121836.1:23899365-23899382
GAACTGTGCAGTACCAACCTGCTGCAGACG23899365TGATCAAGAAGAAGGGAGACCGAGTCCAGGTTGTTATCCATCTTGGTG
Sequence 126 from patent US 7019122.
AR810403.1:80-97
CCATATATAACTTAACACTAAGGTTAACCT80TGATCAAGAAGAAGGGAGTGGGGGGGGGGGTGCATTTATCCTTTATCT
Sequence 61 from Patent EP1792998.
CS597837.1:80-97
CCATATATAACTTAACACTAAGGTTAACCT80TGATCAAGAAGAAGGGAGTGGGGGGGGGGGTGCATTTATCCTTTATCT
SK6-42-1 Arabidopsis thaliana Differential Display Arabidopsis thaliana cDNA clone AtLEA-1 5' similar to late embryogenesis abundant, mRNA sequence.
CA794210.1:13-30
AAGCTTCGACTG13TGATCAAGAAGAAGGGAGTGGAAGAATCAACCCAGAAGATTTCTTGGG
SPLEEN-01-F07-T3 Paralichthys olivaceus cDNA library Paralichthys olivaceus cDNA, mRNA sequence.
CX283799.1:72-89
ACCAGGTCAACATGCTGTCGATACCAGATC72TGATCAAGAAGAAGGGAGACGGAGAAGCGCTGAGCGACGAGGAGATCA
ClauSEQ5014 Cryptococcus laurentii pBluescript (EcoRI-XhoI) Papiliotrema laurentii cDNA clone ClauSEQ5014, mRNA sequence.
DY870482.1:109-126
CGGTCAATGTCGCGGTTGGCTTGAACGCCC109TGATCAAGAAGAAGGGAGGATGGGGTAAACCCGAAGAGGACAAGCACT
CCFT8835.b1_E01.ab1 CCF(STU) sunflower Helianthus annuus cDNA clone CCFT8835, mRNA sequence.
GE513177.1:207-224
TCTTGTATCGTTAAAATCGGCTTATGGCAG207TGATCAAGAAGAAGGGAGTGTTTTCGAGGTTTTTCAAGGCCCGAGCTT
CCFU1968.b1_O11.ab1 CCF(STU) sunflower Helianthus annuus cDNA clone CCFU1968, mRNA sequence.
GE516708.1:174-191
TCTTGTATCGTTAAAATCGGCTTATGGCAG174TGATCAAGAAGAAGGGAGTGTTTTCGAGGTTTTTCAAGGCCCGAGCTT
0270505 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO924601.1:313-330
GTGTGAAAGGTGGAGCGGTTGTTTCGGCGG313TGATCAAGAAGAAGGGAGTGGAAGAATCGACCCATAAGATTACTTGGA
TSA: Psychotria gabriellae, clone contig_28824.
HE850042.1:234-251
AGGGTCTGTGAAGAAGGTGTATAGAGCATT234TGATCAAGAAGAAGGGAGAGAAGTGGCTTGGAACCAAGTGAAGTTGCA
TSA: Melipona quadrifasciata Contig5228.Mequ mRNA sequence.
HP854409.1:62-79
ATGTACGAGGTAAAAGCAGTAGTAATAATT62TGATCAAGAAGAAGGGAGAGATTGAAATTTTGAAAAGTATTTGTAACA
XTM059P04.F XTM Panicum hallii genomic 5', genomic survey sequence.
KO776814.1:574-591
TTGTGCTAAATAAAGAATATGTAGGTTGTT574TGATCAAGAAGAAGGGAGATATGCACGACAACCAACTGCTAAACAGCT
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-168M3.
FP085490.2:36221-36238
CCTCTCCCTGTCCCAGTGCTTCCAGATCAA36221TGATCAAGAAGAAGGGAGAGGGTTGGACCAAGCTTACTGGGCATGAGG
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-229M5.
FP312741.2:135868-135885
CCTCTCCCTGTCCCAGTGCTTCCAGATCAA135868TGATCAAGAAGAAGGGAGAGGGTTGGACCAAGCTTACTGGGCATGAGG
Cryptococcus neoformans var. neoformans JEC21 chromosome 7 sequence.
AE017347.1:778015-778032
ACCGATGAATGAGTGATCCGGAAAGCAGTA778015TGATCAAGAAGAAGGGAGATATTTATTGACAGTACGTATCTCTGAGCA
Talaromyces marneffei isolate 11CN-20-091 chromosome 6, complete sequence.
CP045658.1:773927-773944
CCCCTTTTAGTATCAGTTTACTCTTTGTTT773927TGATCAAGAAGAAGGGAGAAAAACATAAAAATAAAATAAAACACCTTG
Cryptococcus neoformans var. neoformans strain XL280alpha chromosome 07.
CP072817.1:784747-784764
ACCGATGAATGAGTGATCCGGAAAGCAGTA784747TGATCAAGAAGAAGGGAGATATTTATTGACAGTACGTATCTCTGAGCA
Swietenia macrophylla isolate HCNGB_00002344 chromosome 27.
CP135578.1:7626658-7626675
AAATCTTAATTAAAATACGCGATTTTAATT7626658TGATCAAGAAGAAGGGAGAATTTGTGTTAGGGAGTCGAGCTATGTTCT
Canna indica chromosome 4.
CP136893.1:32382596-32382613
AGAATCATTAAGATCAAGAATAACCATCAA32382596TGATCAAGAAGAAGGGAGGGGTGGCGGCTCCTCAAATTTTCGCCATGA
Cryptococcus neoformans var. neoformans JEC21 chromosome 7.
CP141873.1:777951-777968
ACCGATGAATGAGTGATCCGGAAAGCAGTA777951TGATCAAGAAGAAGGGAGATATTTATTGACAGTACGTATCTCTGAGCA
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50548848-50548865
TACATGATTTTACTTTGTCGGTTTGTCCCT50548848TGATCAAGAAGAAGGGAGCTGTTTTTGTATTACAATATAGGTTTTTAG
Avena eriantha genome assembly, chromosome: 3C.
OU342742.1:276990122-276990139
TGCATAAGTAGGACCGAGCCATCGTGTTGG276990122TGATCAAGAAGAAGGGAGGGAGACTATTGCAAGGGGTACAGATACATT
Chenopodium album genome assembly, chromosome: 6.
OX419213.1:8263231-8263248
ATCGTACATTGCACCTATAAATGTTGTCTG8263231TGATCAAGAAGAAGGGAGGAAGTGCACAAAAACAGGTCTTTGGTAGGT
Berberis vulgaris genome assembly, chromosome: 9.
OY747132.1:13781994-13782011
TGAAGAAGTTGTGTTACCTGATCGATGGAT13781994TGATCAAGAAGAAGGGAGTTCACACTTTGGCTCCTCACGGTCAATTTA
Alisma plantago-aquatica genome assembly, chromosome: 5.
OY856413.1:143739912-143739929
AGATTATATGCAAAAAATCATATGAAGTCA143739912TGATCAAGAAGAAGGGAGTCATTATATAGTTATCAATCATTATAAATA
Triticum timopheevii genome assembly, chromosome: 1G.
OY997262.1:191347177-191347194
AGTTGCATAGTATACATCAGGAGGGCACGG191347177TGATCAAGAAGAAGGGAGAAGCTATTTACAGCAGCCCCCACCGCCTAT
Cardamine chenopodiifolia genome assembly, chromosome: 8.
OZ000466.1:13675258-13675275
AGACCTACTGATTCCTCAAGACGAGCAAGC13675258TGATCAAGAAGAAGGGAGATATCACTTCATGTCTCTCTTGTTAAACTT
Fischerella sp. NIES-4106 DNA, nearly complete genome.
AP018298.1:1015834-1015851
GTATCCTGAGTCCAAAGCAGGGATTGGGAC1015834TGATCAAGAAGAAGGGAGTTTATGCAGAGCGAAATATAACCTGTAGTG
2_Tsi_b3v08.
OC006729.1:10943-10960
TACTACCCCTTTGGTTTGTTCGAATATTTA10943TGATCAAGAAGAAGGGAGAATAAAGTAAAGGAAATAAATCCGATATTG
2_Tcm_b3v08.
OE200172.1:1932-1949
TACTACCCCTTTGGTTTGTTCGAATATTTA1932TGATCAAGAAGAAGGGAGAATAAAGTAAAGGAAATAAACCCGATATTG
Melanostoma mellinum genome assembly, chromosome: 3.
OU612060.1:54645614-54645631
GCGTTCAGCTTAATGCGCCTTATCAGCAAC54645614TGATCAAGAAGAAGGGAGAAGCAATACACTAGAACATACACAACAACG
Isoperla grammatica genome assembly, chromosome: 5.
OX246741.1:730640-730657
GTCCGGAAGTGGAACGTGTCGTAGGCGAGC730640TGATCAAGAAGAAGGGAGTGCTGGAGTTCCAAGTGAGCTGCGATGTTT
Gonocerus acuteangulatus genome assembly, chromosome: 8.
OX328130.1:40543058-40543075
ACTATATCTTCTAAATTAGCTACACATTTA40543058TGATCAAGAAGAAGGGAGGAGTATGAGTTTGCCTGAAACCTCCAAAGT
Thera obeliscata genome assembly, chromosome: 2.
OX387913.1:8570632-8570649
GGAAAGAAGAATTGGAGCTGCACTCATTGC8570632TGATCAAGAAGAAGGGAGGAAAAATAGAGACTTCCACAGCATCCTTGG
Acholoe squamosa genome assembly, chromosome: 1.
OX439035.1:45724440-45724457
TCATGGAGGAGAAACCAAGAGCAAGGTAGA45724440TGATCAAGAAGAAGGGAGGCTTCCAACAACTTGACTCAGCATAATAAA
Aspidapion aeneum genome assembly, chromosome: 9.
OY755046.1:62340738-62340755
AATATAATGTAGTTTGTAAAATATACGATT62340738TGATCAAGAAGAAGGGAGTCTTTTCAAAAATTTCTTATGATTATGTGT
Maratus michaelseni genome assembly, chromosome: 9.
OZ007595.1:58671414-58671431
AGAAAGGCAAACCCTGGTACTCTGAATGCA58671414TGATCAAGAAGAAGGGAGGAGAAAACATGTTATGAAAAGCAAAGCTAT
Cataclysta lemnata genome assembly, chromosome: 15.
OZ008353.1:11429995-11430012
GAAAAAGCGATAGATGGATTGCGGGAACAA11429995TGATCAAGAAGAAGGGAGTTCATAATGAGCTCACGTCTGGTAGTAGAG
Priocnemis perturbator genome assembly, chromosome: 13.
OZ012655.1:7792673-7792690
GGAAAATAAAACACTACTAATTTCCAATAT7792673TGATCAAGAAGAAGGGAGTCTGTCATTTTCAACAATTTAAATAGGATG

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