GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-01-07 23:39:09, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 9.
CP141918.1:22906297-22906318
TGTTTAGTTATCATTTGCTTTATACAATCA22906297TGATGCATTAGGGCTTGTACTTCATATTGTGATTGGTTCTCTCTCTCTCTCT
Malus hybrid cultivar cultivar Flame chromosome 9.
CP141935.1:23450489-23450510
GTTTAGTTATCATTTGCTTTTTACAATGCA23450489TGATGCATTAGGGCTTGTACTTCATATTGTGATTGGTTCTCTCTCTCTCTCT
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141958.1:22761969-22761990
TGTTTAGTTATCATTTGCTTTATACAATCA22761969TGATGCATTAGGGCTTGTACTTCATATTGTGATTGGTTCTCTCTCTCTCTCT
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141975.1:23649581-23649602
TGTTTAGTTATCATTTGCTTTATACAATCA23649581TGATGCATTAGGGCTTGTACTTCATATTGTGATTGGTTCTCTCTCTCTCTCT
Malus hybrid cultivar cultivar SH6 chromosome 9.
CP143366.1:12394687-12394708
AGAGAGAGAGAGAGAACCAATCACAATATG12394687AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Malus domestica cultivar Red Fuji chromosome 9.
CP147801.1:12288740-12288761
AGAGAGAGAGAGAGAACCAATCACAATATG12288740AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Malus domestica cultivar Red Fuji chromosome 9.
CP147826.1:12082317-12082338
AGAGAGAGAGAGAGAACCAATCACAATATG12082317AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Malus domestica cultivar WA 38 chromosome 9B.
CP165692.1:12370543-12370564
AGAGAGAGAGAGAGAACCAATCACAATATG12370543AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Malus domestica cultivar WA 38 chromosome 9A.
CP165709.1:12240092-12240113
AGAGAGAGAGAGAGAACCAATCACAATATG12240092AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Malus domestica cultivar Golden Delicious chromosome 09.
CP168773.1:12239347-12239368
AGAGAGAGAGAGAGAACCAATCACAATATG12239347AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Malus domestica cultivar Golden Delicious chromosome 09.
CP168790.1:11991970-11991991
AGAGAGAGAGAGAGAACCAATCACAATATG11991970AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Malus sylvestris genome assembly, chromosome: 9.
OU696511.1:12284659-12284680
AGAGAGAGAGAGAGAACCAATCACAATATG12284659AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Malus domestica genome assembly, chromosome: 9.
OU696685.1:12220774-12220795
AGAGAGAGAGAGAGAACCAATCACAATATG12220774AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Malus domestica genome assembly, chromosome: 9.
OU744550.1:12460756-12460777
AGAGAGAGAGAGAGAACCAATCACAATATG12460756AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Malus domestica genome assembly, chromosome: 9.
OU744961.1:12344414-12344435
AGAGAGAGAGAGAGAACCAATCACAATATG12344414AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Malus domestica genome assembly, chromosome: 9.
OU744999.1:11923821-11923842
AGAGAGAGAGAGAGAACCAATCACAATATG11923821AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Malus x robusta genome assembly, chromosome: 8.
OY720332.1:12047410-12047431
AGAGAGAGAGAGAGAACCAATCACAATATG12047410AAGTACAAGCCCTAATGCATCATGCATTGTAAAAAGCAAATGATAACTAAAC
Yponomeuta plumbellus genome assembly, chromosome: 7.
OX371198.1:17015263-17015284
TGCAGCAGTAATGGCAACTCGCGGTGACCA17015263AAGTACAAGCCCTAATGCATCAGCGCATACTATTGCATCAGCACTATTACAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/tgatgcattagggcttgtactt
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : tgatgcattagggcttgtactt | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.218 | 0.209 | search_plus_done; http://172.18.8.135:50800/match?q=TGATGCATTAGGGCTTGTACTT&k=0&no_gap=0&offset=0&limit=50
0.305 | 0.087 | search_minus_done; http://172.18.8.135:50800/match?q=AAGTACAAGCCCTAATGCATCA&k=0&no_gap=0&offset=0&limit=46
0.315 | 0.010 | cgi_end;

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