GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 00:30:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil mRNA, clone: JMFS037H04, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY938794.1:488-511
ATTGTTTCCAGTTTAGAGAATGTTTTATGT488TCATTTTGCACGCTGTAGCCTTAATCTGTTGGAGTTGCTTTTGAAGTATAAATA
Ipomoea nil mRNA, clone: JMFS052C10, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY939971.1:488-511
ATTGTTTCCAGTTTAGAGAATGTTTTATGT488TCATTTTGCACGCTGTAGCCTTAATCTGTTGGAGTTGCTTTTGAAGTATAAATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ttaaggctacagcgtgcaaaatga
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ttaaggctacagcgtgcaaaatga | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.093 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=TTAAGGCTACAGCGTGCAAAATGA&k=0&no_gap=0&offset=0&limit=50
0.275 | 0.181 | search_minus_done; http://172.18.8.135:50400/match?q=TCATTTTGCACGCTGTAGCCTTAA&k=0&no_gap=0&offset=0&limit=50
0.276 | 0.002 | cgi_end;

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