GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 07:49:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil cDNA clone:jmsf10c18, 5' end.
CJ737044.1:128-151
CCAGTCCCTTCGAGATCCATACAATTCAAG128TTGAATTTCCCAGTTTGGACCACTGTCTCAATCCCTCTAACCGATCATCTTATT
Ipomoea nil cDNA clone:jmsf34f15, 5' end.
CJ746368.1:125-148
CCAGTCCCTTCGAGATCCATACAATTCAAG125TTGAATTTCCCAGTTTGGACCACTGTCTCAATCCCTCTAACCGATCATCTTATT
Ipomoea nil mRNA, clone: JMFS004C08, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY936193.1:83-106
CCAGTCCCTTCGAGATCCATACAATTCAAG83TTGAATTTCCCAGTTTGGACCACTGTCTCAATCCCTCTAACCGATCATGTTATT
Ipomoea nil mRNA, clone: JMFS065F12, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY941006.1:82-105
CCAGTCCCTTCGAGATCCATACAATTCAAG82TTGAATTTCCCAGTTTGGACCACTGTCTCAATCCCTCTAACCGATCATCTTATT
Ipomoea nil mRNA, clone: JMFS067F10, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY941178.1:91-114
CCAGTCCCTTCGAGATCCATACAATTCAAG91TTGAATTTCCCAGTTTGGACCACTGTCTCAATCCCTCTAACCGATCATCTTATT
Ipomoea nil mRNA, clone: JMFS132C08, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY946127.1:141-164
CCAGTCCCTTCGAGATCCATACAATTCAAG141TTGAATTTCCCAGTTTGGACCACTGTCTCAATCCCTCTAACCGATCATCTTATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ttgaatttcccagtttggaccact
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ttgaatttcccagtttggaccact | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.556 | 0.547 | search_plus_done; http://172.18.8.135:50400/match?q=TTGAATTTCCCAGTTTGGACCACT&k=0&no_gap=0&offset=0&limit=50
0.576 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=AGTGGTCCAAACTGGGAAATTCAA&k=0&no_gap=0&offset=0&limit=44
0.576 | 0.000 | cgi_end;

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