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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:54:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Ipomoea trifida cultivar NCNSP0306 chromosome 5.
CP025648.1:12460267-12460290
AAATCGGAGATTATAGCCCTCTGGGCGGGC12460267TTGAATTTGCCGTACCAGATGAGATTGACGGAGATTTTGCCGGCGAGCAATGGG
Fagus sylvatica genome assembly, chromosome: 11.
OU015771.1:24387806-24387829
AAATCTGAGATAATAGCTCTCTGTGTGGGT24387806TTGAATTTGCCGTACCAGATGAGATTGATGGAGATTTTCCCAGTCAGAAGAGGG
Fagus sylvatica genome assembly, chromosome: 11.
OU015771.1:24392905-24392928
AAATCTGAGATAATTGCTCTTTGTGTGGGT24392905TTGAATTTGCCGTACCAGATGAGATTGATTGAGATTTTTCCAGTAAGAAGAGGG
Fagus sylvatica genome assembly, chromosome: 11.
OU015771.1:24406126-24406149
AAATCTGAGATAATAGCTCTCTGTGTGGGT24406126TTGAATTTGCCGTACCAGATGAGATTGATGGAGATTTTCCCAGTCAGAAGAGGG
Fagus sylvatica genome assembly, chromosome: 11.
OU015771.1:24425551-24425574
AAATCTGAGATAATTGCTCTTTGTGTGGGT24425551TTGAATTTGCCGTACCAGATGAGATTGATTGAGATTTTTCCAGTAAGAAGAGGG
Quercus robur genome assembly, chromosome: 12.
OW028776.1:6321242-6321265
AAATCTGAGATAATAGCTCTTTGTGTGGGC6321242TTGAATTTGCCGTACCAGATGAGATTGATGGAGATTTTTCCAGAAAGAAGAGCA
Ipomoea nil cDNA clone:jmsf25f08, 5' end.
CJ742794.1:124-147
CCCATTGCTCGCCGGCAAAATCTCCGTCAA124TCTCATCTGGTACGGCAAATTCAAGCCGGCCCAGAGAGCTATAATCGCCGATTT
Ipomoea nil cDNA clone:jmsf49f06, 5' end.
CJ749931.1:254-277
CCCATTGCTCGCCGGCAAAATCTCCGTCAA254TCTCATCTGGTACGGCAAATTCAAGCCGGCCCAGAGAGCTATAATCGCCGATTT
Quercus mongolica subsp. crispula mRNA, clone: Qm_001_01H01, 5'end sequence, expressed in inner bark.
DB996249.2:270-293
TGCTCTTCTTTCTGGAAAAATCTCCATCAA270TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAACTATTATCTCAGATTT
Fagus crenata mRNA, clone: Fc_TUM08_07O20, 5'end sequence, expressed in inner bark.
DC653871.1:243-266
CCCTCTTCTGACTGGGAAAATCTCCATCAA243TCTCATCTGGTACGGCAAATTCAAACCCACACAGAGAGCTATTATCTCAGATTT
Fagus crenata mRNA, clone: Fc_TUM08_10F22, 5'end sequence, expressed in inner bark.
DC654748.1:123-146
CCCTCTTCTGACTGGGAAAATCTCCATCAA123TCTCATCTGGTACGGCAAATTCAAACCCACACAGAGAGCTATTATCTCAGATTT
sp_d14_48 Sweetpotato cDNA library D Ipomoea batatas cDNA 5', mRNA sequence.
EE880206.1:305-328
CCCATTGCTCGCCGGCAAAATCTCCGTCAA305TCTCATCTGGTACGGCAAATTCAAGCCCGCCCAGAGGGCTATAATCTCCGATTT
Quercus petraea EST, clone WZ0AQPAI4YE23FM1.
FN730197.1:279-302
TGCTCTTCTTTCTGGAAAAATCTCCATCAA279TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAACTATTATCTCAGATTT
Quercus petraea EST, clone WZ0AQPAI2YE13FM1.
FN730922.1:15-38
AAAATCTCCATCAA15TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAACTATTATCTCAGATTT
Quercus robur EST, clone WZ0AQRAP20YI07FM1.
FN754190.1:224-247
TGCTCTTCTTTCTGGAAAAATCTCCATCAA224TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAACTATTATCTCAGATTT
Quercus petraea EST, clone WZ0AQPAH28YM24FM1.
FN766429.1:199-222
TGCTCTTCTTTCTGGAAAAATCTCCATCAA199TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAACTATTATCTCAGATTT
Quercus petraea EST, clone WZ0AQPAH24YG07FM1.
FN766611.1:273-296
TGCTCTTCTTTCTGGAAAAATCTCCATCAA273TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAACTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD7YM11RM1, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP052118.1:263-286
TGCTCTTCTTTCTGGAAAAATCTCCATCAA263TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAACTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD48YE01RM1, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP054947.1:252-275
TGCTCTTCTTTCTGGAAAAATCTCCATCAA252TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAGCTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD46YL03RM1, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP055465.1:243-266
TGCTCTTCTTTCTGGAAAAATCTCCATCAA243TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAGCTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD45YI09RM1, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP055907.1:260-283
TGCTCTTCTTTCTGGAAAAATCTCCATCAA260TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAGCTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD45YD18RM1_2X, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP056008.1:252-275
TGCTCTTCTTTCTGGAAAAATCTCCATCAA252TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAGCTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD35YC17RM1, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP062531.1:270-293
TGCTCTTCTTTCTGGAAAAATCTCCATCAA270TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAACTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD34YN08RM1_2X, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP062781.1:252-275
TGCTCTTCTTTCTGGAAAAATCTCCATCAA252TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAGCTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD33YC18RM1, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP064017.1:276-299
TGCTCTTCTTTCTGGAAAAATCTCCATCAA276TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAACTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD32YB15RM1, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP064832.1:275-298
TGCTCTTCTTTCTGGAAAAATCTCCATCAA275TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAGCTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD31YC12RM1, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP065361.1:252-275
TGCTCTTCTTTCTGGAAAAATCTCCATCAA252TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAGCTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD27YG01RM1, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP067309.1:275-298
TGCTCTTCTTTCTGGAAAAATCTCCATCAA275TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAACTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD1YJ03RM1, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP070625.1:242-265
TGCTCTTCTTTCTGGAAAAATCTCCATCAA242TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAACTATTATCTCAGATTT
Quercus robur root EST, clone LG0AAD10YE19RM1, similar to RLA02_ARATH 60S acidic ribosomal protein P0-2. - Arabidopsis thaliana.
FP074744.1:252-275
TGCTCTTCTTTCTGGAAAAATCTCCATCAA252TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAGCTATTATCTCAGATTT
Fagus sylvatica EST, clone WZ0AFSCA17YJ22FM1.
FR599002.1:268-291
CCCTCTTCTGACTGGGAAAATCTCCATCAA268TCTCATCTGGTACGGCAAATTCAAACCCACACAGAGAGCTATTATCTCAGATTT
CCIG806.b1 CCIG Mimulus guttatus DUN10 floral buds (H) Erythranthe guttata cDNA clone CCIG806 5', mRNA sequence.
GO987856.1:227-250
CGCTCTTCTAAACGGCAGAATCGCCGTCAA227TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACAATCGTCGCCGATTT
CCIC12004.b1 CCIC Mimulus guttatus IM62 roots (H) Erythranthe guttata cDNA clone CCIC12004 5', mRNA sequence.
GR025894.1:173-196
CGCTCTTCTCAACGGTAAAATCGCCGTCAA173TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACCATCGTCGCCGATTT
CCIC12798.b1 CCIC Mimulus guttatus IM62 roots (H) Erythranthe guttata cDNA clone CCIC12798 5', mRNA sequence.
GR027329.1:227-250
CGCTCTTCTCAACGGTAAAATCGCCGTCAA227TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACCATCGTCGCCGATTT
CCIC13179.b1 CCIC Mimulus guttatus IM62 roots (H) Erythranthe guttata cDNA clone CCIC13179 5', mRNA sequence.
GR028006.1:213-236
CGCTCTTCTCAACGGTAAAATCGCCGTCAA213TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACCATCGTCGCCGATTT
CCIC15857.b1 CCIC Mimulus guttatus IM62 roots (H) Erythranthe guttata cDNA clone CCIC15857 5', mRNA sequence.
GR032856.1:231-254
CGCTCTTCTCAACGGTAAAATCGCCGTCAA231TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACCATCGTCGCCGATTT
CCIC16252.b1 CCIC Mimulus guttatus IM62 roots (H) Erythranthe guttata cDNA clone CCIC16252 5', mRNA sequence.
GR033570.1:224-247
CGCTCTTCTCAACGGTAAAATCGCCGTCAA224TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACCATCGTCGCCGATTT
CCBG7890.b1 CCBG Mimulus guttatus IM62 floral buds (H+L) Erythranthe guttata cDNA clone CCBG7890 5', mRNA sequence.
GR117117.1:227-250
CGCTCTTCTCAACGGTAAAATCGCCGTCAA227TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACCATCGTCGCCGATTT
CCBG10434.b1 CCBG Mimulus guttatus IM62 floral buds (H+L) Erythranthe guttata cDNA clone CCBG10434 5', mRNA sequence.
GR121154.1:231-254
CGCTCTTCTCAACGGTAAAATCGCCGTCAA231TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACCATCGTCGCCGATTT
CCBG12655.b1 CCBG Mimulus guttatus IM62 floral buds (H+L) Erythranthe guttata cDNA clone CCBG12655 5', mRNA sequence.
GR124993.1:227-250
CGCTCTTCTCAACGGTAAAATCGCCGTCAA227TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACCATCGTCGCCGATTT
CCBX21064.b1 CCBX Mimulus guttatus IM62 floral buds (N) Erythranthe guttata cDNA clone CCBX21064 5', mRNA sequence.
GR141304.1:244-267
CGCTCTTCTCAACGGTAAAATCGCCGTCAA244TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACCATCGTTGCCGATTT
CCBX22471.b1 CCBX Mimulus guttatus IM62 floral buds (N) Erythranthe guttata cDNA clone CCBX22471 5', mRNA sequence.
GR143461.1:247-270
CGCTCTTCTCAACGGTAAAATCGCCGTCAA247TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACCATCGTCGCCGATTT
CBPF2720.b1 CBPF Mimulus guttatus IM62 roots, seedlings, fruits, callus (H) Erythranthe guttata cDNA clone CBPF2720 5', mRNA sequence.
GR151791.1:210-233
CGCTCTTCTCAACGGTAAAATCGCCGTCAA210TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACCATCGTCGCCGATTT
CBPG12310.b1 CBPG Mimulus guttatus IM62 roots, seedlings, fruits, callus (L) Erythranthe guttata cDNA clone CBPG12310 5', mRNA sequence.
GR187750.1:156-179
CGCTCTTCTCAACGGTAAAATCGCCGTCAA156TCTCATCTGGTACGGCAAATTCAAAACCTCACAGAGGACCATCGTCGCCGATTT
Ipomoea batatas mRNA, clone: IbAES06A13, unspecified EST, cultivar: Fusanoaki.
HX974829.1:260-283
CCCATTGCTCGCCGGCAAAATCTCCGTCAA260TCTCATCTGGTACGGCAAATTCAAGCCCGCCCAGAGGGCTATAATCTCCGATTT
Ipomoea nil mRNA, clone: JMFN006F19, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY927980.1:244-267
CCCATTGCTCGCCGGCAAAATCTCCGTCAA244TCTCATCTGGTACGGCAAATTCAAGCCGGCCCAGAGAGCTATAATCGCCGATTT
TSA: Ipomoea batatas Contig_9003.Ipbalsr mRNA sequence.
JP113591.1:251-274
CCCATTGCTCGCCGGCAAAATCTCCGTCAA251TCTCATCTGGTACGGCAAATTCAAGCCCGCCCAGAGGGCTATAATCTCCGATTT
Quercus dentata isolate Qdleaves-2020 chromosome 12.
CP116455.1:38636280-38636303
TGCTCTTCTTTCTGGAAAAATCTCCATCAA38636280TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAACTATTATCTCAGATTT
Fagus sylvatica genome assembly, chromosome: 2.
OU015762.1:56514702-56514725
CCCTCTTCTTACTGGAAAAATCTCCATCAA56514702TCTCATCTGGTACGGCAAATTCAAACCCACACAAAGAGCTATTATCTCAGATTT
Fagus sylvatica genome assembly, chromosome: 2.
OU015762.1:56519230-56519253
CCCTCTTCTTACTGGAAAAATCTCAATCAA56519230TCTCATCTGGTACGGCAAATTCAAACCCACACAAAGAGCAATTATCTCAGATTT
Fagus sylvatica genome assembly, chromosome: 11.
OU015771.1:24285830-24285853
CCCTCTTCTTACTGGAAAAATCTCAATCAA24285830TCTCATCTGGTACGGCAAATTCAAACCCACACAAAGAGCAATTATCTCAGATTT
Fagus sylvatica genome assembly, chromosome: 11.
OU015771.1:24293817-24293840
CCCTCTTCTGACTGGGAAAATCTCCATCAA24293817TCTCATCTGGTACGGCAAATTCAAACCCACACAGAGAGCTATTATCTCAGATTT
Fagus sylvatica genome assembly, chromosome: 11.
OU015771.1:24301393-24301416
CCCTCTTCTTACTGGAAAAATCTCAATCAA24301393TCTCATCTGGTACGGCAAATTCAAACCCACACAAAGAGCAATTATCTCAGATTT
Fagus sylvatica genome assembly, chromosome: 11.
OU015771.1:24312469-24312492
CCCTCTTCTGACTGGGAAAATCTCCATCAA24312469TCTCATCTGGTACGGCAAATTCAAACCCACACAGAGAGCTATTATCTCAGATTT
Quercus cerris genome assembly, chromosome: 12.
OY770017.1:33629254-33629277
TGCTCTTCTTTCTGGAAAAATCTCCATCAA33629254TCTCATCTGGTACGGCAAATTCAAGCCCACACAAAGAGCTATTATCTCAGATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ttgaatttgccgtaccagatgaga
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ttgaatttgccgtaccagatgaga | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.166 | 0.157 | search_plus_done; http://172.18.8.135:50400/match?q=TTGAATTTGCCGTACCAGATGAGA&k=0&no_gap=0&offset=0&limit=50
3.190 | 3.024 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCATCTGGTACGGCAAATTCAA&k=0&no_gap=0&offset=0&limit=44
3.222 | 0.032 | cgi_end;

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