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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:41:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Chionographis japonica genome assembly, chromosome: 11.
OX393559.1:9491102-9491121
TGCATAATTTTATTCCAAGATGTATAGATG9491102TTGGTATGCCATCCATTTCATTTGAGGACGACGAACTGGTGGTAGAAGGA
Brachypalpus laphriformis genome assembly, chromosome: 1.
OX246753.1:240128233-240128252
CACTGTGGAATAGTTTTTTCTGAAACCAGC240128233TTGGTATGCCATCCATTTCAAGCCAATCTGTCAAATGTTCTAAGATGATT
Ostrea edulis genome assembly, chromosome: 5.
OX387708.1:42034892-42034911
CATACAGATTGAATTAAGACCTTCAAATAT42034892TTGGTATGCCATCCATTTCAGATATCAGCTAATTAATACATTTGGATTCG
Volucella zonaria genome assembly, chromosome: 1.
OZ014530.1:275459008-275459027
TTATTTTGATGGCTAGCTTAAGGACCTTAT275459008TTGGTATGCCATCCATTTCAGGTAATTTGTTATTGCTAAATCGTTTGCAT
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:54449767-54449786
TTCCACATATATACAAAAGCACTTCCCCTT54449767TGAAATGGATGGCATACCAATGTCACACACTCCACAAGCACTGAAGGATG
Trifolium fragiferum genome assembly, chromosome: 7.
OX940795.1:46233757-46233776
TTCCTCATATATATAAAAGCACCCCCCCTT46233757TGAAATGGATGGCATACCAACGTCACACACTCCACAACCTCAAGCACTGA
Brachypalpus laphriformis genome assembly, chromosome: 1.
OX246753.1:26128157-26128176
ATGCAGACGATTCGGCGATAGTAAGTCACC26128157TGAAATGGATGGCATACCAAACAAGGCTCTCAAGCTAGCCATCGAAATAA
Brachypalpus laphriformis genome assembly, chromosome: 4.
OX246756.1:96468987-96469006
TCGCTGGGGGTTCGGCAATAATAAGTCACC96468987TGAAATGGATGGCATACCAAACAAAGCCCTTAAGTGGCGATTAAAACCAG
Nomophila noctuella genome assembly, chromosome: 4.
OY292485.1:5728993-5729012
TCCCACACAAGATATATTAGACAAAGCAAC5728993TGAAATGGATGGCATACCAAAAGAAGTGGTTTCTACATTACATGGTTCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ttggtatgccatccatttca
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ttggtatgccatccatttca | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.160 | 0.152 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGTATGCCATCCATTTCA&k=0&no_gap=0&offset=0&limit=50
0.241 | 0.081 | search_minus_done; http://172.18.8.135:50400/match?q=TGAAATGGATGGCATACCAA&k=0&no_gap=0&offset=0&limit=46
0.244 | 0.003 | cgi_end;

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