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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 13:29:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mus musculus BAC clone RP23-429J21 from chromosome 12, complete sequence.
AC160634.2:78435-78453
TTTAAAAAAATAGAGTTAATTTACAGTTAA78435TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Mouse DNA sequence from clone RP24-264B23 on chromosome 12.
CT030173.7:140141-140159
TTTAAAAAAATAGAGTTAATTTACAGTTAA140141TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Mus musculus genome assembly, chromosome: 12.
OW971555.1:109265159-109265177
TTTAAAAAAATAGAGTTAATTTACAGTTAA109265159TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Mus musculus genome assembly, chromosome: 12.
OW971587.1:109598485-109598503
TTTAAAAAAATAGAGTTAATTTACAGTTAA109598485TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Mus musculus domesticus genome assembly, chromosome: 12.
OW971632.1:108949008-108949026
TTTAAAAAAATAGAGTTAATTTACAGTTAA108949008TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Mus musculus genome assembly, chromosome: 12.
OW971649.1:111272356-111272374
TTTAAAAAAATAGAGTTAATTTACAGTTAA111272356TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Mus musculus molossinus genome assembly, chromosome: 12.
OW971669.1:116396020-116396038
TTTAAAAAAATAGAGTTAATTTACAGTTAA116396020TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Mus musculus genome assembly, chromosome: 12.
OW971734.1:108766968-108766986
TTTAAAAAAATAGAGTTAATTTACAGTTAA108766968TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Mus musculus musculus genome assembly, chromosome: 12.
OW971775.1:109461696-109461714
TTTAAAAAAATAGAGTTAATTTACAGTTAA109461696TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Mus musculus genome assembly, chromosome: 12.
OW971797.1:108126371-108126389
TTTAAAAAAATAGAGTTAATTTACAGTTAA108126371TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Mus musculus genome assembly, chromosome: 12.
OW971848.1:112321809-112321827
TTTAAAAAAATAGAGTTAATTTACAGTTAA112321809TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Heterocephalus glaber genome assembly, chromosome: 8.
OX090916.1:86392820-86392838
GTTCATGGCTTAAAAACAATCATGACATCA86392820TTTCTTGGGTGAAATTTGGTTTGGACCATAATCATGGGTACTATTGATT
Heterocephalus glaber genome assembly, chromosome: 8.
OX090948.1:79170021-79170039
GTTCATGGCTTAAAAACAATCATGACATCA79170021TTTCTTGGGTGAAATTTGGTTTGGACCATAATCATGGGTACTATTGATT
Mus musculus genome assembly, chromosome: 12.
OX390156.1:118489873-118489891
TTTAAAAAAATAGAGTTAATTTACAGTTAA118489873TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Mus musculus genome assembly, chromosome: 12.
OX439027.1:116311583-116311601
TTTAAAAAAATAGAGTTAATTTACAGTTAA116311583TTTCTTGGGTGAAATTTGGAAATAAATCTACATTCCTAGTCTAGTTAGG
Heterocephalus glaber genome assembly, chromosome: 6.
OZ001071.1:59631726-59631744
GTTCATGGCTTAAAAACAATCATGACATCA59631726TTTCTTGGGTGAAATTTGGTTTGGACCATAATCATGGGTACTATTGATT
Heterocephalus glaber genome assembly, chromosome: 6.
OZ001114.1:59013890-59013908
GTTCATGGCTTAAAAACAATCATGACATCA59013890TTTCTTGGGTGAAATTTGGTTTGGACCATAATCATGGGTACTATTGATT
Martes martes genome assembly, chromosome: 6.
OY734068.1:19975235-19975253
AGATTCAGTTAGGGATACTCAGATTATTTG19975235TTTCTTGGGTGAAATTTGGTAATTTTGTAGTTTGTGTCTGAAAGGGATT
Zeus faber genome assembly, chromosome: 1.
OY482845.1:4928300-4928318
AATCCGTGATCATATTACTTTCACTTTCGA4928300TTTCTTGGGTGAAATTTGGGACGTTTGGTTGCCAGGCAGTGTTTTCTGT
Zeus faber genome assembly, chromosome: 1.
OY482845.1:5117565-5117583
AATCCGTGATCAGATTACTTTCACTTTCGA5117565TTTCTTGGGTGAAATTTGGGACGTTTGGTTGCCAGGCAGTGTTTTCTGT
Zeus faber genome assembly, chromosome: 1.
OY482845.1:6657852-6657870
AATCCGTGATCATATTACTTTCACTTTCGA6657852TTTCTTGGGTGAAATTTGGGACGTTTGGTTGCCAGGCAGTGTTTTCTGT
Cinclus cinclus genome assembly, chromosome: 36.
OY759713.1:671399-671417
ATTTGGAGGGTTTTGGGCGAAATTTGGGCT671399TTTCTTGGGTGAAATTTGGAGGTTTTTGGGTGAAATTTTGACATTTTTG
Cinclus cinclus genome assembly, chromosome: 36.
OY759713.1:672878-672896
ATTTGGAGGGTTTTGAATGAAATTTGGGCT672878TTTCTTGGGTGAAATTTGGAGGTTTTTGGGTGAAATTTTGGAGATTTTT
AGENCOURT_19090331 NIH_MGC_189 Mus musculus cDNA clone IMAGE:30840904 5', mRNA sequence.
CK796322.1:728-746
AACTCTTCCTGGGATTTTTTAAAGAACCTA728TTTCTTGGGTGAAATTTGGAAACAC
CH230-338O3.TV CHORI-230 Segment 2 Rattus norvegicus genomic clone CH230-338O3, genomic survey sequence.
BZ138829.1:427-445
GGAGAATGGGTCTGTGGTTGAAATCCACAT427TTTCTTGGGTGAAATTTGGGCAGGTTCAGATGAGGACAGCTGTTGATTG
29-025345-5.SEQ Pigeonpea genomic pBluescript library Cajanus cajan genomic 3', genomic survey sequence.
CZ445553.1:271-289
TACAATTATTATATTTTATTATTATTATTT271TTTCTTGGGTGAAATTTGGTATATGCATTTTAAGGCATATTTGCACTCA
Solanum tuberosum chromosome 6 clone RHPOTKEY097B09, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces.
AC235967.1:49910-49928
TATTCCTTTCTGTTCCTTTTGTAACGCTCT49910TTTCTTGGGTGAAATTTGGATATACATTCAAAAACTAGCTTGTCATAAG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 7.
CP124713.1:6790576-6790594
TTCCTTTCTTGTTCCTTTTGTAATCTCTCT6790576TTTCTTGGGTGAAATTTGGCTATTCATTCAAAAACCTGCATATCATAAG
Ulota crispa genome assembly, chromosome: 3.
OY987244.1:3324251-3324269
TTTCATCTAGATTTTGGCAACCATATTATT3324251TTTCTTGGGTGAAATTTGGCAATTTGCCCACTTTTTTAAGCCAATTTTT
Habrosyne pyritoides genome assembly, chromosome: 20.
OU015605.1:2286797-2286815
AGAGCGACAATGCACACTTGGGTCTTAAAA2286797TTTCTTGGGTGAAATTTGGATCTCTTTATAAGAGCTCTGCCTTCATCTT
Zygaena filipendulae genome assembly, chromosome: 21.
OU015670.1:4495200-4495218
AAATATGTTTTAACTTGTCTTTGACTTGCT4495200TTTCTTGGGTGAAATTTGGACGTTAGACATATTTTGTTAGGTATCTTAT
Coremacera marginata genome assembly, chromosome: 3.
OU612045.1:33477104-33477122
TTTTTCAAAAATTGTTGGGCCTTTTCTCGT33477104TTTCTTGGGTGAAATTTGGTTTTGGGCGATTTTTCATTAATTTTTGCGT
Coremacera marginata genome assembly, chromosome: 4.
OU612046.1:47853184-47853202
TTTTCAAAAATTTTTTGGATTTTTTTTCGC47853184TTTCTTGGGTGAAATTTGGTTTTTTCTTTTTGGCTGACTTTTCATTAAT
Agrochola macilenta genome assembly, chromosome: 7.
OU753559.1:16353006-16353024
AATCAACTCCTATATGATTTTGACTGTAAG16353006TTTCTTGGGTGAAATTTGGGTGTACTATATAGGTACTCCTCTGCCTTAC
Machimus atricapillus genome assembly, chromosome: X.
OW121785.1:26221514-26221532
GGATAGGGACGATTGATGTCAGGTAATAAT26221514TTTCTTGGGTGAAATTTGGGATTTGTAGGATTATCAGAATAATTTTCTC
Machimus atricapillus genome assembly, chromosome: 2.
OW121786.1:18818286-18818304
GGATAGGGACGATTGATGTCAGGTAATAAT18818286TTTCTTGGGTGAAATTTGGGATTTGTAGGATTATCAGAATAATTTTCTC
Machimus atricapillus genome assembly, chromosome: 3.
OW121787.1:17927927-17927945
GGATAGGGACGATTGATATCAGGTAATAAT17927927TTTCTTGGGTGAAATTTGGGATTTGTAGGATTATCAGAATAATTTTCTC
Machimus atricapillus genome assembly, chromosome: 3.
OW121787.1:19682558-19682576
GGATAGGGACGATTGATGTCAGGTAATAAT19682558TTTCTTGGGTGAAATTTGGAATTTGTAGGATTATCAGAATGATTTTCTC
Agriotes lineatus genome assembly, chromosome: 6.
OW679199.1:6686059-6686077
ATGGTACTGAAGTCCATTGGTTCAGGTCTA6686059TTTCTTGGGTGAAATTTGGTTTGGGTGCAAATGTGTTATAGTTTGGGTT
Pterostichus niger genome assembly, chromosome: 10.
OX380343.1:11254451-11254469
TCGAAAAAAAGTCTCTTTTTCAAATGCCTA11254451TTTCTTGGGTGAAATTTGGCCATTTTGAACCCCCGAGACATCAAAAGGT
Pyrausta nigrata genome assembly, chromosome: 5.
OX438941.1:3680685-3680703
GTTTAAGATCTTCGCACTCCCGCGTATGTC3680685TTTCTTGGGTGAAATTTGGACACATCGTGGGATGAGGTTGTGGTCTCTG
Pyrausta nigrata genome assembly, chromosome: 8.
OX438944.1:14700733-14700751
GTTTAAGATCTTCGCACTCCCGCGTATGTC14700733TTTCTTGGGTGAAATTTGGACACATCGTGGGATGAGGTTGTGGTCTCTG
Pyrausta nigrata genome assembly, chromosome: 8.
OX438944.1:14703317-14703335
GTTTAAGATCTTCGCACTCCCGCGTATGTC14703317TTTCTTGGGTGAAATTTGGACACATCGTGGGATGAGGTTGTGGTCTCTG
Pyrausta nigrata genome assembly, chromosome: 8.
OX438944.1:14705901-14705919
GTTTAAGATCTTCGCACTCCCGCGTATGTC14705901TTTCTTGGGTGAAATTTGGACACATCGTGGGATGAGGTTGTGGTCTCTG
Pyrausta nigrata genome assembly, chromosome: 22.
OX438958.1:9974851-9974869
GTTTAAGATCTTCGCACTCCCGCGTATGTC9974851TTTCTTGGGTGAAATTTGGACACATCGTGGGATGAGGTTGTGGTCTCTG
Amphiduros pacificus genome assembly, chromosome: 2.
OX439001.1:24902432-24902450
CTGGATTGTGCGCATGTGCCATTTTGAACA24902432TTTCTTGGGTGAAATTTGGATCCTTAGTGGCATCTTCATACCACGTGCC
Dysmachus trigonus genome assembly, chromosome: 2.
OX454320.1:54581660-54581678
GGATAGGGACAACTGATGTTAGATAGTAAT54581660TTTCTTGGGTGAAATTTGGGATTTGTAGGATTACCAGAATAATCTTTTC
Dysmachus trigonus genome assembly, chromosome: 3.
OX454321.1:37139521-37139539
GGATAGGGACAACTGATGTTAGATAGTAAT37139521TTTCTTGGGTGAAATTTGGGATTTGTAGGATTACCAGAATAATCTTTTC
Dysmachus trigonus genome assembly, chromosome: 3.
OX454321.1:37147180-37147198
GGATAGGGACAACTGATGTTAGATAGTAAT37147180TTTCTTGGGTGAAATTTGGGATTTGTAGGATTACCAGAATAATCTTTTC
Dysmachus trigonus genome assembly, chromosome: 3.
OX454321.1:61220042-61220060
GGATAGGGACAACTGATGTTAGATAGTAAT61220042TTTCTTGGGTGAAATTTGGGATTTGTAGGATTACCAGAATAATCTTTTC
Luidia sarsii genome assembly, chromosome: 5.
OX465105.1:5493179-5493197
GGGCGGGGCGAACATGGACTTTTTTCAATG5493179TTTCTTGGGTGAAATTTGGCGCTAACAAAAAATTTAGAAATCAATCCTA
Machimus rusticus genome assembly, chromosome: 1.
OX608049.1:17210846-17210864
GAATAGGGACGATTGATGTCAGGTAATAAT17210846TTTCTTGGGTGAAATTTGGGATTTGTAGGACTATTAGAATAATTTTCCC
Machimus rusticus genome assembly, chromosome: 3.
OX608051.1:20999500-20999518
GAATAGGGACGATTGATGTCAGGTAATAAT20999500TTTCTTGGGTGAAATTTGGGATTTGTAGGACTATCAGAATAATTTTCCC
Machimus rusticus genome assembly, chromosome: 3.
OX608051.1:24910024-24910042
AGGTTATCTCGGTTTGGAATAGGGAATAAT24910024TTTCTTGGGTGAAATTTGGGATTTGTAGGACTATCAGAATAATTTTCCC
Machimus rusticus genome assembly, chromosome: 4.
OX608052.1:22237509-22237527
GAATAGGGACGATTGATGTCAGGTAATAAT22237509TTTCTTGGGTGAAATTTGGGATTTGTAGGACTATCAGAATAATTTTCCC
Machimus rusticus genome assembly, chromosome: 5.
OX608053.1:11955035-11955053
GAATAGGAACGATTGATGTCAGGTAATAAT11955035TTTCTTGGGTGAAATTTGGGATTTGTAGGACTATCAGAATAATTTTCCC
Stenodema calcarata genome assembly, chromosome: 6.
OY986053.1:33753576-33753594
GGAAGTTGAGTAGTTGACTAGTGGTTGGTA33753576TTTCTTGGGTGAAATTTGGTTGGTCTTCTATAAATTTGTCTCTCAATGC
Stenodema calcarata genome assembly, chromosome: 8.
OY986055.1:32482605-32482623
GGAAGTTGAGTAGTTGATTAGTGGTTGGTA32482605TTTCTTGGGTGAAATTTGGTTGGTCTTCTATAAATTTATCTCTCAATGC
Stenodema calcarata genome assembly, chromosome: 10.
OY986057.1:1571504-1571522
GGAAGTTGAGTAGTTGATTAGTGGTTGGTA1571504TTTCTTGGGTGAAATTTGGTTGGTCTTCTATAAATTTATCTCTCAATGC
Stenodema calcarata genome assembly, chromosome: 13.
OY986060.1:277134-277152
GGAAGTTGAGTAGTTGATTAGTGGTTGGTA277134TTTCTTGGGTGAAATTTGGTTGGTCTTCTATAAATTTATCTCTCAATGC
Phania funesta genome assembly, chromosome: 1.
OZ010652.1:90728350-90728368
GTTCCTCCCATAATATTTTGCATGTTACTT90728350TTTCTTGGGTGAAATTTGGCAATAAATTTTTTGCCTAATTAGGGTGCTC
Maratus speciosus genome assembly, chromosome: 5.
OZ010791.1:331446705-331446723
TGTTTGGTTTTTTAAACTGTTGACGTGAAA331446705TTTCTTGGGTGAAATTTGGTTTCGTTTTGTTAGTATTATTAGCCTTTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/tttcttgggtgaaatttgG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : tttcttgggtgaaatttgG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.289 | 0.280 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCTTGGGTGAAATTTGG&k=0&no_gap=0&offset=0&limit=50
0.355 | 0.066 | search_minus_done; http://172.18.8.135:50400/match?q=CCAAATTTCACCCAAGAAA&k=0&no_gap=0&offset=0&limit=0
0.355 | 0.000 | cgi_end;

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