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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2024-11-24 06:56:43, GGGenome : DDBJ release 134.0, VRT division (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gallus gallus BAC clone CH261-127B8 from chromosome z, complete sequence.
AC189016.1:93625-93639
GAACAATGGAAACGAGCTATGGATTACTTA93625AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
Callorhinchus milii BAC clone IMCB_Eshark-16H12 from chromosome unknown, complete sequence.
AC238864.1:63987-64001
TCGGAAGAGCTCCTCGGCTCACTTTTAATG63987AATGTTGTCAATGAAAAGAATTTTGTTATCGATCGGAACCAAGAG
Zebrafish DNA sequence from clone DKEY-29G23.
AL953844.7:170025-170039
AAGCCATCTGAAATTAAATGTTTCAATTTA170025AATGTTGTCAATGAATCAGATTTAGTTTCAAGTGTACATACGGCA
Epinephelus fuscoguttatus DNA, LG1, complete sequence.
AP022675.1:17095754-17095768
GGTCATTGAAACGTCATGAAAAAGTTTTGA17095754AATGTTGTCAATGAAAATGTGTTTATGCACACGTTGCACTCATTG
Epinephelus fuscoguttatus DNA, LG4, complete sequence.
AP022678.1:17276193-17276207
ATAATCAATCAAAATATTGCTAGTAAAATG17276193AATGTTGTCAATGAAATGTCAATGTCACAAAAAATGTTTTAAAAA
Epinephelus fuscoguttatus DNA, LG15, complete sequence.
AP022689.1:8903550-8903564
AACTAACTCTTGCTCAGACAAAGTTCTCAA8903550AATGTTGTCAATGAAAATGGTTATTTTACATAAAATGCATATACT
Epinephelus fuscoguttatus DNA, LG16, complete sequence.
AP022690.1:36982695-36982709
ATTCCCCGCTGAAAATAAAACGAGTTTGTA36982695AATGTTGTCAATGAATATTATGTGTCCCTCTCACCTGACCATGCT
Epinephelus fuscoguttatus DNA, LG18, complete sequence.
AP022692.1:4418717-4418731
TCAATAAGGGAATCGTTAAACGTAAAGGCT4418717AATGTTGTCAATGAATTGAACCAGTTGGAACCTCAATTCCCATCC
Epinephelus fuscoguttatus DNA, LG22, complete sequence.
AP022696.1:13817308-13817322
ATTCCAATGTTGTCAATGTTGAGTTATTCC13817308AATGTTGTCAATGAAAATTTTGGCTTTATCTTTGTTATATTTATT
Epinephelus fuscoguttatus DNA, LG23, complete sequence.
AP022697.1:21520604-21520618
GTATATAGGCGTATAGTGAATCAGTTTTAT21520604AATGTTGTCAATGAATTACAGATGAGAAAACTGCAGAAAATCACA
Plectropomus leopardus DNA, chromosome 2, nearly complete sequence.
AP022701.1:14520912-14520926
TGCATGCACTATATATCCCCTTCTATGTTA14520912AATGTTGTCAATGAAGGTGTTAATGTCATGTTATGTTTTCTCTGT
Plectropomus leopardus DNA, chromosome 3, nearly complete sequence.
AP022702.1:4133659-4133673
TAAACTAACTAGTGTGAGAGATCAGTGGAT4133659AATGTTGTCAATGAATGTCTTCAGAGCGCCCCTTGGTGCATTCTA
Plectropomus leopardus DNA, chromosome 10, nearly complete sequence.
AP022709.1:6030488-6030502
CCTGGAGGGAACTGTGGTGTTAAACGCTGA6030488AATGTTGTCAATGAAAAGCAATTTCACATAGCTTCCTTTATTTCC
Plectropomus leopardus DNA, chromosome 12, nearly complete sequence.
AP022711.1:2594160-2594174
AATTTAGCTTTAGCCCCTTTTTATTGTGAA2594160AATGTTGTCAATGAATATTTTCTGTCATGCTTTTCATTGACAAAA
Plectropomus leopardus DNA, chromosome 15, nearly complete sequence.
AP022714.1:16304991-16305005
CAGTCTTTACATCTGGCAGTCATTAGAGTT16304991AATGTTGTCAATGAAAACTAATAAAAGCATTGTCAAACCAAAATC
Plectropomus leopardus DNA, chromosome 18, nearly complete sequence.
AP022717.1:13957706-13957720
TGAGCGTATATCAACCCAACTGGCAGAAGA13957706AATGTTGTCAATGAATTATTCTGCAATAAGTTACATTTGCATGTT
Plectropomus leopardus DNA, chromosome 19, nearly complete sequence.
AP022718.1:25665616-25665630
CCTTTTATTTACCTTATGCGCCATAAACAA25665616AATGTTGTCAATGAATATTTGTCATCACAGTTTTTCTTGACAAAA
Plectropomus leopardus DNA, chromosome 21, nearly complete sequence.
AP022720.1:6554873-6554887
AATAATCATGCTTTAGCTGTTATGGGATGA6554873AATGTTGTCAATGAACATTTCCCAGATATGTTCCGCACTAACTTT
Plectropomus leopardus DNA, chromosome 23, nearly complete sequence.
AP022722.1:2361947-2361961
CTTCATCTTCTCTTCCTCTTCCTCTGTTAC2361947AATGTTGTCAATGAAGTCCACATGCTCAGCCTCTCCATTAACTGC
Zebrafish DNA sequence from clone CH211-208O6 in linkage group 24.
BX248581.17:9458-9472
TATTCTACAGTTGTGTTTCCAATTAACTCA9458AATGTTGTCAATGAACCAATCAGAAACTTTCAAAACCTTGACATT
Zebrafish DNA sequence from clone DKEYP-114G10 in linkage group 7.
BX324119.5:56566-56580
TGATTTTACCAGTGAATAAAATGGTCTAAT56566AATGTTGTCAATGAAAGATTGCAAGCATATATCTCAAACATAATT
Zebrafish DNA sequence from clone DKEY-193B15 in linkage group 2.
BX470229.4:31240-31254
AAAGCAAACTGAAATTAAATGTTTCAATTG31240AATGTTGTCAATGAATCTTAAAATGTACAGTAAATATGTCACTCG
Zebrafish DNA sequence from clone RP71-80D18 in linkage group 4.
BX511190.9:36563-36577
GCAGAGCTTCAAAAAAGCATGTTTCAATTA36563AATGTTGTCAATGAATCAGATTTTTTAAAATGTAAATAATATCAA
Zebrafish DNA sequence from clone DKEY-177G18 in linkage group 23.
BX548247.6:28097-28111
CATTTTATCAGTAAAAACAAAAGGTCTAAT28097AATGTTGTCAATGAAAAATGACAAGCATATATCACAAACATAATA
Zebrafish DNA sequence from clone DKEY-174I19 in linkage group 18 Contains the gene for a novel protein similar to vertebrate dihydrofolate reductase (DHFR), the cry1b gene for cryptochrome 1b, the ge
BX571976.11:166163-166177
TCTTTTTTGTGTGTACTACTACAAGTGATG166163AATGTTGTCAATGAAGAGCATTGCCATTTAGATCACTTTTTTGCA
Zebrafish DNA sequence from clone DKEY-12N3 in linkage group 4.
BX649331.16:81798-81812
GTTTCAAAAAGAAATGAGCCAAGGTCATAC81798AATGTTGTCAATGAAGCAGGACAACAGTTTCGCCGCAACAGACGC
Zebrafish DNA sequence from clone CH211-170D11 in linkage group 18.
BX649610.5:61969-61983
ACTTTTTTGTGTGTACTACTACAAGTGATG61969AATGTTGTCAATGAAGAGCATTGCCATTTAGATCACTTTTTTGCA
Oryzias latipes strain HSOK chromosome 7.
CP020627.1:31806551-31806565
GAACAGAGCGATTCTGGGGAGCCTCTCATC31806551AATGTTGTCAATGAACACATTGAAGACCTGCAGGTTAGGGTTACA
Oryzias latipes strain HSOK chromosome 20.
CP020640.1:13750675-13750689
AATTTGAATCAATTAAAAAAATTATAGCAA13750675AATGTTGTCAATGAAAAAAATTACAAACAAAAAAGATTCTGTCAA
Oryzias latipes strain Hd-rR chromosome 2 sequence.
CP020666.1:22175742-22175756
TTTCTTTTGTGAGGGGCCTGCACCACAGAG22175742AATGTTGTCAATGAACTGGCTGAGGTTTTACACTATGTACTTTCT
Oryzias latipes strain Hd-rR chromosome 6 sequence.
CP020670.1:29061163-29061177
AAATTAACTTCATCCGCAACAAAAAAGAAA29061163AATGTTGTCAATGAAAGCCACTTCCATTCTCGTAATACATAATTT
Oryzias latipes strain Hd-rR chromosome 7 sequence.
CP020671.1:9362608-9362622
CATTGTGTTATGCGTCCTGATTGGCTGTAG9362608AATGTTGTCAATGAATCTCCTCCGTGCTGCATGTCCTGTACAGAC
Oryzias latipes strain Hd-rR chromosome 7 sequence.
CP020671.1:30915085-30915099
GAACAGAGCGATTCTGGGGAGCCTCTCATC30915085AATGTTGTCAATGAACACATTGAAGACCTGCAGGTTAGGGTTACA
Oryzias latipes strain Hd-rR chromosome 20 sequence.
CP020684.1:12565027-12565041
AATTTGAATCACTTAAAAAAATGATAGCAA12565027AATGTTGTCAATGAAAAAAATTACAAACAAAAAAGATTCTGTCAA
Oryzias latipes strain Hd-rR chromosome 22 sequence.
CP020686.1:1230301-1230315
ACCAAGAAAACCGTCGATTGACAGCAAAGA1230301AATGTTGTCAATGAATCCAAGGATGTTTCATCTTCATCAAAGGCG
Oryzias latipes strain HNI chromosome 2.
CP020780.1:19515745-19515759
TTTCTTTTGTGAGGGCCCTGCACCGCAGAG19515745AATGTTGTCAATGAACCGGCTGAGGTTTTACACTATGTACTTTCT
Oryzias latipes strain HNI chromosome 7.
CP020785.1:9204315-9204329
CATTGTGTTATGCGTTCTGATTGGCTGTAG9204315AATGTTGTCAATGAATCTCCTCCGTGCTGCATCTCCTGTACAGAC
Oryzias latipes strain HNI chromosome 7.
CP020785.1:30195443-30195457
GAACAGAGCGATTCTGGGGAGCCTCTCATC30195443AATGTTGTCAATGAACACATTGAAGACCTGCAGGTTAGGGTTACA
Oryzias latipes strain HNI chromosome 20.
CP020798.1:11040573-11040587
AATTTGAATCACTTAAAAAAATGATAGCAA11040573AATGTTGTCAATGAAAAAAATTACAAACAAAAAAGATTCTGTCAA
Scophthalmus maximus chromosome 1.
CP026243.1:2493959-2493973
AGAGGGGCTGTTTGCGTATGTGAAAATGCA2493959AATGTTGTCAATGAATGTACATAAAAACACTTCTTTCCGCAGCAG
Scophthalmus maximus chromosome 14.
CP026256.1:1415060-1415074
CTCCTTCTTACAGCCGAAGTCCGGTCGCAG1415060AATGTTGTCAATGAAGAAGTTAGTGGTTCTGTGGGCCTGCTGGGC
Scophthalmus maximus chromosome 22.
CP026264.1:4727549-4727563
TATATTTCTGTTTAATACACTTTTTAAAAA4727549AATGTTGTCAATGAATCCCATTCTTTTATCCATACCTCCAGTATG
Lateolabrax maculatus chromosome Lm5.
CP027266.1:20085434-20085448
CATAGAATTTGTTGACTAACATACTGAGGA20085434AATGTTGTCAATGAATGTCTGGCAAGTCACAAAATGTTGATACTG
Lateolabrax maculatus chromosome Lm23.
CP027284.1:26220588-26220602
AAACAACAGTGAGCTGAACTAGGTAAAGCG26220588AATGTTGTCAATGAATGGACAAAGAATCACATTTGTCCAAACCTT
Lateolabrax maculatus linkage group 1 genomic sequence, sequence.
CP032584.1:28765005-28765019
AAACAACAGTGAGCTGAACTAGGTAAAGCG28765005AATGTTGTCAATGAATGGACAAAGAATCACATTTGTCCAAACCTT
Lateolabrax maculatus linkage group 12 genomic sequence, sequence.
CP032586.1:3730676-3730690
TGATATGTTGTATTTTTATAAATGTATTAC3730676AATGTTGTCAATGAACCAAACCATCTCAGAACTCCAAATGAAAGC
Lateolabrax maculatus linkage group 16 genomic sequence, sequence.
CP032590.1:17918853-17918867
AATGGAGGACGTGGAATTATGTGCAAAATA17918853AATGTTGTCAATGAAATGAAAGATCACATCGCATTGCACATATTC
Lateolabrax maculatus linkage group 24 genomic sequence, sequence.
CP032599.1:12622846-12622860
GTTTCTGTGTAGTTTAATCGAACATCAAAA12622846AATGTTGTCAATGAAAGTAATCCGGGTTTTGCAGAACAAAATTTA
Lateolabrax maculatus linkage group 9 genomic sequence, sequence.
CP032606.1:9839341-9839355
TATTTTCCCCCAGTTAAATTGAATCTTGGC9839341AATGTTGTCAATGAAAAAACGCCTATGGTGTTGTATGTTTACTGT
Lateolabrax maculatus linkage group 9 genomic sequence, sequence.
CP032606.1:20410216-20410230
TTGTTTGGATTTATGTAACGGCATCAAACA20410216AATGTTGTCAATGAACCTCGTCCTGTTTTGATTGCCTTTTATGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj134vrt/AATGTTGTCAATGAA
lang : ja | db : ddbj134vrt | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.090 | 0.081 | search_plus_done; http://172.18.8.135:50405/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.128 | 0.038 | search_minus_done; http://172.18.8.135:50405/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=0
0.128 | 0.000 | cgi_end;

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