GGGenome | Results

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2025-04-09 00:09:46, GGGenome : Drosophila melanogaster genome, BDGP R5/dm3 (Apr, 2006)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

chr3L:16092264-16092278

CGCGACGTGGACGGGCAGGATGTGCTGCTC16092264TTCATTGACAACATTTTCCGTTTCACCCAGGCGGGATCGGAGGTG

chr3R:26821500-26821514

TGTTGCGGTGCGCGTACGTGGCGTATACGC26821500AATGTTGTCAATGAACCTGCACGGATTATTGGCATTAAGTAAGCC

chrX:1041153-1041167

CTCTTTAAAATCCCATTAATCCTCTTATTA1041153AATGTTGTCAATGAACGGCTCTTTAGGCTTGATAGATTATTTAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.079 | 0.071 | search_plus_done; http://172.18.8.76:28099/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.084 | 0.004 | search_minus_done; http://172.18.8.76:28099/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=49
0.084 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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