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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2024-12-22 13:20:44, GGGenome : Cat genome, ICGSC Felis_catus_8.0/felCat8 (Nov, 2014)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

chrA1:164231825-164231839
GAACAGTGGAAACGGGCTATGGATTACTTA164231825AATGTTGTCAATGAACTCAATTATATGACTCAGATTGTTATCATG
chrA2:25401672-25401686
GCCTGTTTTTCATATGCATATGTAATAGTG25401672AATGTTGTCAATGAAAACACAATAGTATTTGGAGTGCAGCATACC
chrA2:105213265-105213279
TTGTTTTCTTGTTTCATTCCCTTAATTATT105213265AATGTTGTCAATGAAGCAGGAATTACCCAAAATGATGAGGAAAGG
chrA2:123910848-123910862
AGAGGGGTAAAAGTGATACCTCCTAAGACT123910848AATGTTGTCAATGAAGTAAATCCACGCCTATGAGAAGTTTACCTG
chrB1:78883422-78883436
TTAATATTAATATTAAATGGATGCCCACAG78883422AATGTTGTCAATGAAAATCTGTGTTTAAAGTGATAATATATTCTA
chrB2:26276581-26276595
CCTTGGTCAGTGTCCCCTCTTGCTTTTTAT26276581AATGTTGTCAATGAAGATTATTGGTATCTAAACACCACCCCACTC
chrB3:81218072-81218086
TGATCATGAAAAATTGTATTTTTCTCACAA81218072AATGTTGTCAATGAAAAGAGCACTAAAAATAGTAGATAAAGTCTG
chrC1:82651133-82651147
AGATAGAAAGAGAGAGAGAGAATGCAAATA82651133AATGTTGTCAATGAAATCACAGGCTACCAAAGGGGGGGGGAAAGG
chrC1:181252522-181252536
AGTTCTTAAGTGGCAGTAACGCCATGATAA181252522AATGTTGTCAATGAACATTTCTTCATCACTCTTGATATTCTATGT
chrD1:87858373-87858387
TGACAATGTGTCACTTTAGAGATTATCATT87858373AATGTTGTCAATGAAAAGCCATTTCTCATCATCCTTATGCCAGTT
chrD2:767157-767171
CAGGGCTTGCAACTGTCATGCTCTGAAAAC767157AATGTTGTCAATGAATCAATCTCATGGCTTCTCTTTTTAGCTGTA
chrF1:59267211-59267225
GGAATGTGTATGACAGAGAGAGAATTTCAA59267211AATGTTGTCAATGAAGGGCGCCTGGGTGGCTGAGTCGGCTAAGCA
chrB2:67522330-67522344
GTTGGGGCCAGAGTTCCATCCAGAATTAAG67522330TTCATTGACAACATTCCCCTCACCACTCACTCTTTCCCAGACTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/felCat8/AATGTTGTCAATGAA
lang : ja | db : felCat8 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.082 | 0.073 | search_plus_done; http://172.18.8.78:28754/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.088 | 0.006 | search_minus_done; http://172.18.8.78:28754/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=38
0.088 | 0.000 | cgi_end;

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