GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-11-22 12:56:02, GGGenome : Medium ground finch genome, GeoFor_1.0/geoFor1 (Apr, 2012)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

JH739892:3416562-3416576
AATTTATCTGCATAATCATGTGAATGTAAC3416562TTCATTGACAACATTACACATGGACAATTGATAATGAAATCATTG
JH739887:893863-893877
CCAGCTGTGACTCTGAAGGAGAGAAGGGGC893863AATGTTGTCAATGAAGGCACTTCTATTTTAATTTATAGGATAGCT
JH739888:17569337-17569351
AAATACCTTTGTGTGCTCATGTAGACATCA17569337AATGTTGTCAATGAAATAAAATTTCACAAAATTTACCTACATTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/geoFor1/TTCATTGACAACATT
lang : en | db : geoFor1 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.081 | 0.072 | search_plus_done; http://172.18.8.76:28079/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.085 | 0.003 | search_minus_done; http://172.18.8.76:28079/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=49
0.085 | 0.001 | cgi_end;

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