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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2024-11-25 07:23:42, GGGenome : Crab-eating macaque genome, macFasRKS1912v2 (Oct, 2021)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

chr2
position: 82749480-82749494
ACTATGCTGCACTCCAAATACTATTGTGTT82749480TTCATTGACAACATTCCCTATTACATATGCATATGAAAAACAGGC
chr5
position: 145071770-145071784
CAGAATATATTATCGCTTTGAACACAGATT145071770TTCATTGACAACATTTTGTGGGCATCCATTTAATATTAATATTAA
chr5
position: 161934065-161934079
TAAAACCTCTGATTTTGTGTAACACTCCTT161934065TTCATTGACAACATTAAACAGCAATTAACTATTTGCTGACTACAT
chr5
position: 177467467-177467481
TTTGGACCCCCAGATCAGTCTTCATATTCT177467467TTCATTGACAACATTCATGAAGTTCTGCAGAAATTAGATAGAATT
chr5
position: 182261015-182261029
GCCTGAGCCACCATGCCCAGCTTGCTATTC182261015TTCATTGACAACATTCACTTAAACAAACAAACATCCATAAAATTA
chr14
position: 84919887-84919901
TTGAGTTTCCAGGAACATAGATATGTCTTG84919887TTCATTGACAACATTCTAGCGTTGAGGACAGTGAATAGAGCAAAC
chr17
position: 47324578-47324592
TGTTCAAAGTTTTCCCCTCCAATGTATCTT47324578TTCATTGACAACATTCGGATTTATCACATCAATCAGTCAATAAAT
chr17
position: 64160464-64160478
GCAGTCTGGAGGTTCTCCCTGGAGGCTGTA64160464TTCATTGACAACATTGCCTGAGGTAACTCACACTGAGGTGACAAC
chr19
position: 38709181-38709195
GTGAGCCACCATGCTGGCCTATCTTAGCTT38709181TTCATTGACAACATTAGTATAATGTTAACAGCTCTCCTAAGGGAA
chr11
position: 75943955-75943969
GTAAGATAGGTTTGTTCCAGAAGTTTAAAA75943955AATGTTGTCAATGAATTTGATAAAATTTAATATTCACATTAGAAG
chr16
position: 63484173-63484187
TTCTGCCCTTTCACAAATAAACATAAAATC63484173AATGTTGTCAATGAAGCATGGCCCATCTAATATAGGCCCAGAGGC
chr19
position: 38499189-38499203
ACTCCCTTAGGAGAGCTGTAACATTATACT38499189AATGTTGTCAATGAAAAGCTAAGACAGGCCAGGGGTGGTGGCTCA
chr19
position: 38550077-38550091
CTCCCTTAGGAGAGCCGTTAACATTATACT38550077AATGTTGTCAATGAAAAAGCTAAGATAGGCAGGGCGTGGTGGCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/macFasRKS1912v2_d3g2202/TTCATTGACAACATT
lang : ja | db : macFasRKS1912v2_d3g2202 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.080 | 0.071 | search_plus_done; http://172.18.8.78:28911/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.090 | 0.010 | search_minus_done; http://172.18.8.78:28911/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=41
0.093 | 0.003 | cgi_end;

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