GGGenome | Results

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2025-04-09 07:29:40, GGGenome : Crab-eating macaque genome, CE_1.0 (Jul, 2011)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

chr11
position: 77243946-77243960

GTAAGATAGGTTTGTTCCAGAAGTTTAAAA77243946AATGTTGTCAATGAATTTGATAAAATTTAATATTCACATTAGAAG

chr14
position: 47423552-47423566

GTTTGCTCTATTCACTGTCCTCAACGCTAG47423552AATGTTGTCAATGAACAAGACATATCTATGTTCCTGGAAACTCAA

chr2
position: 80004272-80004286

ACTATGCTGCACTCCAAATACTATTGTGTT80004272TTCATTGACAACATTCCCTATTACATATGCATATGAAAAACAGGC

chr5
position: 143786337-143786351

CAGAATATATTATCGCTTTGAACACAGATT143786337TTCATTGACAACATTTTGTGGGCATCCATTTAATATTAATATTAA

chr5
position: 160911052-160911066

TAAAACCTCTGATTTTGTGTAACACTCCTT160911052TTCATTGACAACATTAAACAGCAATTAACTATTTGCTGACTACAT

chr5
position: 176594540-176594554

TTTGGACCCCCAGATCAGTCTTCATATTCT176594540TTCATTGACAACATTCATGAAGTTCTGCAGAAATTAGATAGAATT

chr12
position: 104260694-104260708

GCCTGAGCCACCATGCCCAGCTTGCTATTC104260694TTCATTGACAACATTCACTTAAACAAACAAACATCCATAAAATTA

chr16
position: 14305595-14305609

GCCTCTGGGCCTATATTAGATGGGCCATGC14305595TTCATTGACAACATTGATTTTATGTTTATTTGTGAAAGGGCAGAA

chr17
position: 48176872-48176886

TGTTCAAAGTTTTCCCCTCCAATGTATCTT48176872TTCATTGACAACATTCGGATTTATCACATCAATCAGTCAATAAAT

chr17
position: 65446857-65446871

GCAGTCTGGAGGTTCTCCCTGGAGGCTGTA65446857TTCATTGACAACATTGCCTGAGGTAACTCACACTGAGGTGACAAC

scaffold144
position: 11414-11428

GTTCCAAGAAACTGCTCTCTAGGAGGTGCA11414TTCATTGACAACATTTCCAAGGAACTCCTTTGTGACGTGTGAGTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

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Debug Info:

0.009 | 0.009 | search_start;
0.081 | 0.073 | search_plus_done; http://172.18.8.77:28229/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.087 | 0.006 | search_minus_done; http://172.18.8.77:28229/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=48
0.093 | 0.006 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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