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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-04 22:06:52, GGGenome : Mouse genome, GRCm38/mm10 (Dec, 2011)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

chr1:3202348-3202361
CCAATTTGAAAATTTAAAACTTTGATTGAG3202348TCCATTGACAAC-TTAATTTTAGAGAATCAGAGGAGATTATATTG
chr1:3202826-3202839
AATATGGTGCTGAAGCCTTTGAACAAGCAC3202826TTCACTGA-AACATTTAAAATACATTTATAATATGGAGATGAATC
chr1:3293581-3293595
GGTTGATTGACCCTGGGCATCTTCAGAAAT3293581TTCATTGGCAAAATTGAATGCTGGCCTCCTAATGGCCACCTCCAA
chr1:3324434-3324447
AATTATTCTTTCATTGAATTGAATTGTTCT3324434TTCATTGA-AACATAGAAGTTCCAAAGTAAAAAGATAATCTCATG
chr1:3391472-3391485
TCATAAAGCAAATGCCGGAGGCTTTCGGAG3391472TT-ATTAACAACATTTTTGTATTATATAAAATGGCATATGACATC
chr1:3568735-3568748
ATGCTTCCAGTACCAGTGTGATGACTATTG3568735TTCATTGTCAAC-TTGAATAATTTGAATGAACTACAATCCACAAA
chr1:3587965-3587978
AGACATTCTGGGAAAAGGCTAGTATACCTT3587965TTCA-TGACCACATTGAAGTTGCACTAAGTCAGGGTTCCTTTGCA
chr1:3790704-3790717
ATAATCCTTCATGAAGCATTATCTTCGTGC3790704TACATTGA-AACATTTTTTTTTTATATATAACTGAAATCTGTGCC
chr1:3800532-3800546
GGTGATACTTTAGAAGATTTAGAATCTGTG3800532TTCATTTGACAA-ATTAATCTATCTGGCAGTCACCGTGCTCTATCT
chr1:3822128-3822141
TAAACAAAGTATGTCAAAAGAAAAAAAAAG3822128TTCATT-ACAACTTTCTTATGCTCTAGAAGAACTTAAGCTCAGCT
chr1:3927926-3927939
AGATAACTGTGGCTCAGGTTCTGGTAAGTT3927926TTAATTGA-AACATTAGTCCACCATTACGGAAGCACAAATATGTC
chr1:4012528-4012542
AACACAATTATTTTAACCTAGATAACTTTT4012528TTCATAGACAACACTTCCAGTATGAGTAATTTAGTCTATCAAAAA
chr1:4098732-4098745
GTTGTTGTTACTTATAAATTACCATGCTTG4098732TTCATTGA-AACTTTTTTATTAAGTATTTCTTTGATTTTTGTTTT
chr1:4184407-4184420
TAACCTAGATATCCATGAACTGATAGCTCA4184407TACATTGAC-ACATTGGAATACTTTCCAGTCTTTAAGAAAAAATG
chr1:4195691-4195704
GAGGATAACTAATTAGTACATTTCATTTGC4195691TTCATT-ACAAAATTCCATGGTTCCTACCACTCAAAATTTTAATA
chr1:4209140-4209152
ATTTAGAGTTAAGTGCTCTGAAGTATTCAC4209140TTCATTG--AACATTGTCCAGTTGTGGGTCTCAGTGTCATCTCTT
chr1:4283870-4283884
CTATGAACCTACCTACAAGTTTAGTGGATT4283870TTC-TTGATCAACATTACATAAAATAGAAAGAGCACCTTCTAGCAG
chr1:4337545-4337559
CTATCAGATCACCAAGGACTAAGGTTGATC4337545TTCAATGACAACATAAATAATAGAAAGCCAACATTCACGTGGAAA
chr1:4458155-4458167
TTGAGTTGTTGGTCAGAGTTGTCCAAGAGA4458155TTC-TTGA-AACATTATAGGCGATTTCTATTGCCCTTGGTTGCCC
chr1:4642614-4642627
CTCCACTTTCTTTCTTTTAATTATCATTGG4642614TTCATTGA-AACAATTGGGTACTGTCATCTTCTTTTTGCTCAGGA
chr1:4651438-4651451
CCTTATACAAGACAGGTATACCAGGGTCCC4651438TTCATTAA-AACATTGCTGGCATATGCAATAGTGTCTGGGTTTGG
chr1:5107647-5107660
TTTACACAAGCAAATATAAACACACATAAA5107647TTCATAGACAA-ATTCATGCTTACATATTCATACATCTCCATTCA
chr1:5310637-5310651
CATATTACTGTACACATTCAGGTCTTTATA5310637TTCTCTGACAACATTCTAATTCAATGATTAAAATATTGTCTTTCA
chr1:5754209-5754222
ACCATTTGTAGATGAGCAATCAAGACTCAC5754209TT-ATTGCCAACATTAATCAGTTATGAGTCTCTGAATTACCTAAT
chr1:6076722-6076738
GCCAGTCACCGAGGCCACCTCTGTTGCAAG6076722TTCATTGCACAAACATTCGTTGAGTGCCTGATTCAGAAGGCATTGTG
chr1:6204538-6204551
GTGCAGCTTTGGCTGCTGTGATGGCTACTG6204538TTCATTGTCAAC-TTGACTCTATGTGGAATGAATGACAGTCCAGA
chr1:6212627-6212640
TAAAAAGCACTTTTAGTTGTTCCTTGAAAA6212627TTCACTGA-AACATTGACAGATACTAAATTAAAAATTCAGTGGAA
chr1:6370337-6370351
TTATTTGTAGAATAGCTTATAGCTATTTGG6370337TTCACTGAAAACATTTAGTGTGGGAAGAGGTCAAGGTGGAAAGGG
chr1:6409011-6409023
TTCATATACATCTATTCATTCCCCTTTATA6409011TT-ATTGAC-ACATTTTACAGACTTGTACACATCCGTTAACATGG
chr1:6701683-6701697
TTCCTAGAGCTTATGATGAGAGAGGCCATT6701683TTCATTGACATCTTTAGACTCTGGCTCAGGATAAGTACTCCCAAA
chr1:6714622-6714635
AATGTGATGAGTCTAAATGTATTGATTACA6714622TTCAGTGA-AACATTTAGAAAGTGTTTAACTGATTCTAAAGACAT
chr1:6987786-6987800
ATACAAAGAATCAACCAAACAAGGACCTGG6987786TTCTTTGACAAAATTAGCAAAATAGATAAATCCTTAGCTAGATTA
chr1:7094026-7094039
ACTGCCTTGACATGTAAGAAGCATTTCATT7094026TTCATTGCC-ACATTTTTGTTTCAAAATTCTGTTTGTTCTGTATT
chr1:7427022-7427036
ACACACATAGGATCTTGCCTTTTAAATAAA7427022TTCATTGACAAGTTTAAATTCATAGTTTAGCAATGATTCCAGTAT
chr1:7445896-7445909
GTAAAGCTATTATAAAACACCATCAAATAT7445896TTAATTGACAA-ATTTTTAAAGATTACAAAGGATAGAAATGGCTA
chr1:7563996-7564009
GGAGGAATTGGCGCGGTTTTACATGATTGG7563996TTCATTTA-AACATTAACAGACTGTCAGAAGGGCGGGAGATAGAG
chr1:7622547-7622560
CTTAGCCTCTGGGTCCCACCCCCTTGGTAT7622547TTCATTGACC-CATTTACAGGAACCAAGCAACAGTCAGGGACAGG
chr1:7685114-7685130
ATTCTATATTGTGGTCAGATTCCTTGACAC7685114TTCAATTGACAGACATTTAATAAGATGCTGTTATGAAGCAACATTTA
chr1:7742261-7742274
GGGATGGACACCGAGTTGTTTTTCTTAACT7742261ATCATTGACAA-ATTCTGTCCTAACATCATTCCAAGTCCACAGTC
chr1:7769719-7769733
AACACTGACTGCTCTCCCAGAGGTCTTGAG7769719TTCATTCACAACAATCATATCGTGGCTCACAAAGATCTGTAAATG
chr1:8114171-8114185
GGGCGGGTTAAGGTTTATAGTGGCTCAAAC8114171TTCATTGACAACCTGATATATCTGTATTTGAAACCATTCTAACAG
chr1:8167112-8167125
AGAGCTGTCCAACCGTTTCATATGGAAGAT8167112TTC-TTGACAAGATTGGTAGAGCAAATATTACTCATCTTATTTAT
chr1:8293229-8293243
ATACCTAGCAAGTGCCTTATCTTTTAAGGC8293229TGCATTGACAAAATTTAGCACTTGGACTGCCTCCAGGGACAGTGT
chr1:8450133-8450146
TCATAATAAGGAAACAAACTTAAAGTGACT8450133TTCATTGACAT-ATTTTATAGCCTTCTGATAAAAATTAACTAGCT
chr1:8582825-8582838
CTCTATGTTATCACCTTTTATTTGGATCTT8582825TTCATTCAC-ACATTCTCTGCCACAGTCCTAGGGTCACTGAAGAC
chr1:8678567-8678579
TGTGTTTATGTCTGAAGGTATGTATGTGCA8678567TTCATTGA-AA-ATTGATCACTCTTCTTAATGGGTGATCAATTTC
chr1:8797157-8797170
GGTCATAATAATGCCTCATAATTAAAAAAA8797157TTCATTTAC-ACATTAACTAGAATCTAGCAATTATCCCAGACAAA
chr1:8863562-8863574
ATACTATATAATATTGCAGAATATGTTAAC8863562TT--TTGACAACATTCACTGTGATTTTTTTTTTGCTTTTTGCTTT
chr1:8909834-8909847
TGCTTGGTACTACTTCCATGAGGGTTCATC8909834TTCATTGTCAAC-TTGATTGTCTTAGGAATTGCCTAGAGTCACAC
chr1:8950374-8950388
GTAATATTGACTAATATGTACATATTTTTT8950374TTCATTTATAACATTTAGGTTTTACAGATAGGATACAATCAGAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/mm10/2/TTCATTGACAACATT
lang : ja | db : mm10 | k : 2 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.010 | 0.010 | search_start;
0.090 | 0.079 | search_plus_done; http://172.18.8.78:28019/match?q=TTCATTGACAACATT&k=2&no_gap=0&offset=0&limit=50
0.111 | 0.021 | search_minus_done; http://172.18.8.78:28019/match?q=AATGTTGTCAATGAA&k=2&no_gap=0&offset=0&limit=0
0.111 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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