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2025-04-09 00:37:02, GGGenome : RefSeq complete RNA release 200 (May, 2020)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Agaricus bisporus var. bisporus H97 ATP2 beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase (AGABI2DRAFT_190409), mRNA
XM_006457965.1:1000-1014

CGTGATGAAGAAGGTCAGGATGTGTTGCTC1000TTCATTGACAACATTTTCCGTTTCACCCAGGCCGGTTCCGAGGTG

Cordyceps militaris CM01 ATP synthase beta chain (CCM_07426), partial mRNA
XM_006672567.1:871-885

CGTGATGAGGAAGGTCAGGACGTGCTGCTC871TTCATTGACAACATTTTCCGTTTCACTCAGGCTGGTTCTGAGGTG

PREDICTED: Neolamprologus brichardi homeobox protein engrailed-1-like (LOC102789766), mRNA
XM_006806441.1:359-373

GCCCAACAGGCCCACAGAACCACCAACTTT359TTCATTGACAACATTTTGAGACCGGACTTTGGCTGCAAGAAGGAG

PREDICTED: Neolamprologus brichardi histone-lysine N-methyltransferase SUV39H1-like (LOC102791492), mRNA
XM_006807165.1:1030-1044

TGTAACCCTAACCTGCAGGTATACAACGTG1030TTCATTGACAACATTGACGAAAGGCTTCCGAGAATTGCGTTATTT

PREDICTED: Chrysochloris asiatica coronin, actin binding protein, 2B (CORO2B), mRNA
XM_006866553.1:277-291

GGCAACGTGCTGGACATCAAGTGGAACCCC277TTCATTGACAACATTATCGCCTCATGTTCAGAGGACACCTCCGTG

Agaricus bisporus var. burnettii JB137-S8 ATP2 beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase (AGABI1DRAFT_111188), mRNA
XM_007326499.1:1000-1014

CGTGATGAAGAAGGTCAGGATGTGTTGCTC1000TTCATTGACAACATTTTCCGTTTCACCCAGGCCGGTTCCGAGGTG

Coniophora puteana RWD-64-598 SS2 ATP synthase F1 beta subunit mRNA
XM_007766058.1:968-982

CGTGACGAGGAGGGCCAGGACGTGCTTCTG968TTCATTGACAACATTTTCCGCTTCACGCAAGCCGGTTCCGAGGTA

Coniophora puteana RWD-64-598 SS2 hypothetical protein partial mRNA
XM_007775178.1:2305-2319

ATGAACGAAGTCAAAGAGTCGGCTCAAAGC2305TTCATTGACAACATTCAGAGGAGAACGGTCTTTGTTTCCCAAAAC

Endocarpon pusillum Z07020 ATP synthase subunit beta mRNA
XM_007802133.1:979-993

CGTGACGAGGAAGGACAGGACGTGCTGCTC979TTCATTGACAACATTTTCCGATTCACCCAGGCTGGTTCTGAGGTG

Metarhizium acridum CQMa 102 ATP synthase beta chain precursor partial mRNA
XM_007816203.1:1081-1095

CGTGACCAGGAAGGCCAGGATGTGCTGCTC1081TTCATTGACAACATTTTCCGATTCACTCAGGCCGGCTCTGAGGTG

Pestalotiopsis fici W106-1 ATP synthase subunit beta mRNA
XM_007837839.1:871-885

CGTGACGCCGAGGGACAGGATGTGCTGCTC871TTCATTGACAACATTTTCCGTTTCACCCAGGCCGGTTCCGAGGTG

PREDICTED: Stegastes partitus homeobox protein engrailed-1-like (LOC103355596), transcript variant X1, mRNA
XM_008279450.1:396-410

GCTCAGCAGGCCCACAGAACCACCAACTTT396TTCATTGACAACATTTTGCGACCGGACTTCGGCTGTAAAAAGGAG

PREDICTED: Stegastes partitus homeobox protein engrailed-1-like (LOC103355596), transcript variant X2, mRNA
XM_008279451.1:396-410

GCTCAGCAGGCCCACAGAACCACCAACTTT396TTCATTGACAACATTTTGCGACCGGACTTCGGCTGTAAAAAGGAG

PREDICTED: Equus przewalskii activating signal cointegrator 1 complex subunit 1 (ASCC1), transcript variant X1, mRNA
XM_008539341.1:744-758

TGTGAGATGCTACAGCAGTGTAAAGAGGAA744TTCATTGACAACATTTGTGGGGGCAAACCCCTGGAAGTAGAGATG

PREDICTED: Equus przewalskii activating signal cointegrator 1 complex subunit 1 (ASCC1), transcript variant X2, mRNA
XM_008539342.1:742-756

TGTGAGATGCTACAGCAGTGTAAAGAGGAA742TTCATTGACAACATTTGTGGGGGCAAACCCCTGGAAGTAGAGATG

PREDICTED: Ursus maritimus dynein, axonemal, heavy chain 5 (DNAH5), transcript variant X1, mRNA
XM_008689897.1:6457-6471

ATCATAAGGGTGAAGCTGGCTAGTTGTGGC6457TTCATTGACAACATTGTGTTGGCCAGGAAGTTTTTCACACTCTAC

PREDICTED: Ursus maritimus dynein, axonemal, heavy chain 5 (DNAH5), transcript variant X2, mRNA
XM_008689898.1:6451-6465

ATCATAAGGGTGAAGCTGGCTAGTTGTGGC6451TTCATTGACAACATTGTGTTGGCCAGGAAGTTTTTCACACTCTAC

Cyphellophora europaea CBS 101466 ATP synthase subunit beta, mitochondrial partial mRNA
XM_008715668.1:1486-1500

AGAGACGAAGAAGGTCAAGATGTGTTGCTC1486TTCATTGACAACATTTTCCGCTTCACTCAGGCCGGTTCTGAAGTG

Wallemia ichthyophaga EXF-994 hypothetical protein partial mRNA
XM_009268544.1:907-921

CGTGACGATGAAGGTCAAGATGTCTTGCTC907TTCATTGACAACATTTTCCGTTTCACTCAAGCTGGTTCTGAAGTT

Heterobasidion irregulare TC 32-1 beta subunit of putative F0F1-type ATP synthase mRNA
XM_009544597.1:984-998

CGTGATGAGGAAGGTCAGGATGTGTTGCTC984TTCATTGACAACATTTTCCGCTTCACTCAGGCCGGTTCCGAGGTG

PREDICTED: Cariama cristata ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide (ATP5B), partial mRNA
XM_009697087.1:619-633

AGGGACCAGGAGGGTCAGGACGTGCTGCTC619TTCATTGACAACATTTTCCGCTTCACCCAGGCTGGCTCAGAGGTG

Neurospora tetrasperma FGSC 2508 H+-transporting ATP synthase beta chain mRNA
XM_009854061.1:982-996

CGTGATGAGGAGGGTCAGGATGTGTTGCTC982TTCATTGACAACATTTTCCGTTTCACCCAGGCCGGTTCTGAGGTG

Nicotiana sylvestris ATP synthase subunit beta, mitochondrial-like (LOC104229400), mRNA
NM_001302565.1:993-1007

AGAGATGCTGAGGGGCAGGATGTGCTTCTC993TTCATTGACAACATTTTCAGATTTACCCAGGCTAACTCAGAGGTG

PREDICTED: Populus euphratica ATP synthase subunit beta, mitochondrial-like (LOC105124531), mRNA
XM_011024585.1:1120-1134

CGTGATGCTGAAGGGCAAGATGTGCTTCTC1120TTCATTGACAACATTTTCCGCTTTACCCAGGCTAACTCAGAGGTG

PREDICTED: Populus euphratica uncharacterized LOC105127860 (LOC105127860), mRNA
XM_011029320.1:5024-5038

CTCCCAGTTTGTGAACCATTATCTAGACGA5024TTCATTGACAACATTGAGAAGCCAAAAGTTCAGCAGCTAATCAGT

PREDICTED: Populus euphratica ATP synthase subunit beta, mitochondrial (LOC105135509), mRNA
XM_011040401.1:1087-1101

CGTGATGCTGAAGGGCAAGATGTGCTTCTA1087TTCATTGACAACATTTTCCGCTTTACCCAGGCTAACTCAGAGGTG

PREDICTED: Populus euphratica ATP synthase subunit beta, mitochondrial-like (LOC105119519), mRNA
XM_011017661.1:1124-1138

CGTGATGCTGAAGGGCAAGATGTGCTTCTC1124TTCATTGACAACATTTTCCGCTTTACCCAGGCTAACTCAGAGGTG

Capsaspora owczarzaki ATCC 30864 ATP synthase subunit beta mRNA
XM_004364639.2:980-994

CGTGACGAGGAAGGCCAGGATGTGCTGCTC980TTCATTGACAACATTTTCCGCTTCACCCAGGCCGGTTCCGAGGTG

Metarhizium robertsii ARSEF 23 ATP synthase beta chain mRNA
XM_007823312.1:871-885

CGTGACCAGGAAGGCCAGGATGTGCTACTC871TTCATTGACAACATTTTCCGATTCACTCAGGCCGGTTCTGAGGTG

PREDICTED: Fragaria vesca subsp. vesca chlorophyll a-b binding protein CP29.2, chloroplastic (LOC101309848), mRNA
XM_004302588.2:607-621

GTCGTCTTACTTGGGACAGCCGCTTCCATT607TTCATTGACAACATTGATCTGGATCGAGGTTCTGGTGATCGGCTA

PREDICTED: Gossypium raimondii ATP synthase subunit beta, mitochondrial (LOC105779299), mRNA
XM_012603054.1:1071-1085

CGTGATGCTGAAGGGCAGGATGTGCTTCTC1071TTCATTGACAACATTTTCCGTTTTACTCAAGCAAACTCTGAAGTG

PREDICTED: Gossypium raimondii ATP synthase subunit beta, mitochondrial-like (LOC105779300), mRNA
XM_012603055.1:1066-1080

CGTGATGCAGAAGGGCAGGATGTGCTTCTC1066TTCATTGACAACATTTTCCGTTTTACTCAAGCAAACTCTGAAGTG

Colletotrichum graminicola M1.001 ATP synthase F1 partial mRNA
XM_008098766.1:871-885

CGTGACGAAGAAGGACAGGATGTGTTGCTC871TTCATTGACAACATTTTCCGTTTCACCCAGGCCGGTTCCGAGGTG

Acytostelium subglobosum LB1 hypothetical protein partial mRNA
XM_012904189.1:769-783

GTGATGGAGCTACAGTCATCGGATAGAAGG769TTCATTGACAACATTATCAACACAATCAATGATCCACAGCAGCAG

Schistosoma haematobium Cyclin-dependent kinase 16 mRNA
XM_012936972.1:147-161

AGAAGAAGAAATTGAAAGCGAAGAATTCAA147TTCATTGACAACATTTCAATCATGTACTACCGAACAGGAGAATTT

Schistosoma haematobium hypothetical protein mRNA
XM_012937928.1:909-923

TACAAGAAATAATTCTTCATTGAACATGCA909TTCATTGACAACATTTGCATTGAAACAAAATAATCTATCTTTCAT

PREDICTED: Dipodomys ordii dynein, axonemal, heavy chain 5 (Dnah5), mRNA
XM_013013842.1:6541-6555

ATCATCAGGGTGAAGTTGGCCAGTTGTGGC6541TTCATTGACAACATTGTTCTAGCCAGGAAGTTTTTCACACTCTAC

Schizosaccharomyces octosporus yFS286 F1-ATPase beta subunit Atp2 mRNA
XM_013160621.1:1022-1036

CGTGACGTTGAAGGTCAAGATGTCTTGTTC1022TTCATTGACAACATTTTCCGTTTCACTCAAGCTGGTTCTGAGGTG

PREDICTED: Papilio polytes ATP synthase subunit beta, mitochondrial (LOC106104691), partial mRNA
XM_013284821.1:682-696

CGTGATCAGGAGGGTCAGGATGTACTGCTC682TTCATTGACAACATTTTCCGTTTCACTCAGGCTGGTTCTGAGGTG

PREDICTED: Papilio xuthus ATP synthase subunit beta, mitochondrial-like (LOC106115960), mRNA
XM_013309627.1:981-995

CGTGACCAGGAGGGTCAGGATGTGCTGCTC981TTCATTGACAACATTTTCCGTTTCACTCAAGCCGGTTCTGAAGTG

PREDICTED: Amyelois transitella ATP synthase subunit beta, mitochondrial (LOC106134642), mRNA
XM_013334736.1:973-987

CGCGACCAAGAAGGACAGGATGTGCTACTT973TTCATTGACAACATTTTCCGTTTCACCCAAGCTGGGTCAGAAGTG

Exophiala aquamarina CBS 119918 ATP synthase subunit beta, mitochondrial partial mRNA
XM_013402041.1:883-897

CGTGACGAAGAAGGACAGGATGTGTTGCTC883TTCATTGACAACATTTTCCGTTTCACTCAAGCCGGTTCCGAAGTA

Aureobasidium subglaciale EXF-2481 hypothetical protein mRNA
XM_013491984.1:1147-1161

CGTGACGAGGAGGGTCAGGATGTGCTTCTC1147TTCATTGACAACATTTTCCGTTTCACCCAGGCCGGTTCCGAGGTG

Aureobasidium namibiae CBS 147.97 ATP synthase F1, beta subunit partial mRNA
XM_013575907.1:871-885

CGTGACGAGGAGGGTCAGGATGTGCTTCTC871TTCATTGACAACATTTTCCGTTTCACCCAGGCCGGTTCCGAGGTG

PREDICTED: Brassica oleracea var. oleracea ATP synthase subunit beta-1, mitochondrial-like (LOC106327128), mRNA
XM_013765194.1:1026-1040

CGTGATGCCGAGGGCCAAGATGTGTTGCTT1026TTCATTGACAACATTTTCCGTTTCACTCAGGCCAACTCTGAAGTG

PREDICTED: Brassica oleracea var. oleracea ATP synthase subunit beta-1, mitochondrial (LOC106327662), mRNA
XM_013765881.1:1048-1062

CGTGATGCCGAGGGCCAAGATGTGTTGCTT1048TTCATTGACAACATTTTCCGTTTCACTCAGGCCAACTCTGAAGTG

PREDICTED: Brassica oleracea var. oleracea ATP synthase subunit beta-1, mitochondrial-like (LOC106318231), mRNA
XM_013756119.1:1038-1052

CGTGATGCTGAAGGCCAAGATGTGTTGCTT1038TTCATTGACAACATTTTCCGTTTCACTCAGGCTAACTCTGAAGTG

PREDICTED: Brassica oleracea var. oleracea ATP synthase subunit beta-2, mitochondrial-like (LOC106318936), mRNA
XM_013757106.1:1053-1067

CGTGATGCCGAAGGCCAAGATGTGTTGCTT1053TTCATTGACAACATTTTCCGTTTCACTCAGGCTAACTCTGAAGTG

PREDICTED: Apteryx australis mantelli tyrosyl-tRNA synthetase 2, mitochondrial (YARS2), transcript variant X1, mRNA
XM_013947467.1:1232-1246

TTATTTTAACAGTGGGGCTTTTTTTTTTTT1232TTCATTGACAACATTTAAAGTTAATCCAGTGGCTATGAATGTCAG

Trichoderma atroviride IMI 206040 ATP synthase beta chain mitochondrial precursor (atp2), partial mRNA
XM_014090091.1:862-876

CGTGACCAGGAAGGCCAGGATGTCCTGCTC862TTCATTGACAACATTTTCCGATTCACCCAGGCCGGTTCTGAGGTG

Data Export:

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Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/refseq200/TTCATTGACAACATT
lang : en | db : refseq200 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.209 | 0.200 | search_plus_done; http://172.18.8.74:28835/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.258 | 0.049 | search_minus_done; http://172.18.8.74:28835/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=0
0.258 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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