GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-11-22 08:38:04, GGGenome : RefSeq complete RNA release 70 (May, 2015)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

PREDICTED: Canis lupus familiaris diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_005618049.1:2811-2825
GAACAGTGGAAACGAGCTATGGATTACTTA2811AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Canis lupus familiaris diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_005618050.1:2811-2825
GAACAGTGGAAACGAGCTATGGATTACTTA2811AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Canis lupus familiaris diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_005618051.1:2811-2825
GAACAGTGGAAACGAGCTATGGATTACTTA2811AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Canis lupus familiaris diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X4, mRNA
XM_005618052.1:2811-2825
GAACAGTGGAAACGAGCTATGGATTACTTA2811AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Canis lupus familiaris diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X11, mRNA
XM_546000.4:2811-2825
GAACAGTGGAAACGAGCTATGGATTACTTA2811AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Canis lupus familiaris diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X5, mRNA
XM_005618053.1:2811-2825
GAACAGTGGAAACGAGCTATGGATTACTTA2811AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Canis lupus familiaris diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X6, mRNA
XM_005618054.1:2811-2825
GAACAGTGGAAACGAGCTATGGATTACTTA2811AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Canis lupus familiaris diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X7, mRNA
XM_005618055.1:2811-2825
GAACAGTGGAAACGAGCTATGGATTACTTA2811AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Canis lupus familiaris diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X8, mRNA
XM_005618056.1:2811-2825
GAACAGTGGAAACGAGCTATGGATTACTTA2811AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Canis lupus familiaris diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X9, mRNA
XM_005618057.1:2811-2825
GAACAGTGGAAACGAGCTATGGATTACTTA2811AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Canis lupus familiaris diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X10, mRNA
XM_005618058.1:2811-2825
GAACAGTGGAAACGAGCTATGGATTACTTA2811AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Sus scrofa diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), partial mRNA
XM_003354233.3:1828-1842
GAGCAGTGGAAACGAGCTATGGATTATTTA1828AATGTTGTCAATGAACTCAACTATATGACTCAGATCGTTATCATG
PREDICTED: Capra hircus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_005683463.1:3174-3188
GAACAGTGGAAACGAGCTATGGATTATTTA3174AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Capra hircus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_005683464.1:3121-3135
GAACAGTGGAAACGAGCTATGGATTATTTA3121AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Capra hircus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_005683465.1:3119-3133
GAACAGTGGAAACGAGCTATGGATTATTTA3119AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Capra hircus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X4, mRNA
XM_005683466.1:3121-3135
GAACAGTGGAAACGAGCTATGGATTATTTA3121AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Bos mutus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_005889806.1:2623-2637
GAACAGTGGAAACGAGCTATGGATTATTTA2623AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Bos mutus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_005889807.1:2572-2586
GAACAGTGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Bos mutus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_005889808.1:3425-3439
GAACAGTGGAAACGAGCTATGGATTATTTA3425AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Bos mutus ATP-binding cassette sub-family A member 13-like (LOC102280877), mRNA
XM_005899645.1:7681-7695
CTTTATTTTCTTTTGCTACAAAGTGTTCGA7681AATGTTGTCAATGAAATGATTACTTTAAAAAAGGCAGATCATTTA
PREDICTED: Pantholops hodgsonii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_005960302.1:3424-3438
GAACAGTGGAAACGAGCTATGGATTATTTA3424AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Alligator sinensis diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_006022895.1:2912-2926
GATCAGTGGAAGCGAGCTATGGATTATCTC2912AATGTTGTCAATGAACTTAATTACATGACTCAGATTGTTATCATG
PREDICTED: Alligator sinensis diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_006022896.1:2981-2995
GATCAGTGGAAGCGAGCTATGGATTATCTC2981AATGTTGTCAATGAACTTAATTACATGACTCAGATTGTTATCATG
PREDICTED: Alligator sinensis diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_006022897.1:2912-2926
GATCAGTGGAAGCGAGCTATGGATTATCTC2912AATGTTGTCAATGAACTTAATTACATGACTCAGATTGTTATCATG
PREDICTED: Camelus ferus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_006186700.1:2593-2607
GAACAGTGGAAACGAGCTATGGATTATTTA2593AATGTTGTCAATGAACTCAACTACATGACTCAAATTGTTATCATG
PREDICTED: Camelus ferus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_006186701.1:2584-2598
GAACAGTGGAAACGAGCTATGGATTATTTA2584AATGTTGTCAATGAACTCAACTACATGACTCAAATTGTTATCATG
PREDICTED: Vicugna pacos diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_006207981.1:2608-2622
GAACAGTGGAAACGAGCTATGGATTATTTA2608AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Alligator mississippiensis diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_006259153.1:2912-2926
GATCAGTGGAAGCGAGCTATGGATTATCTC2912AATGTTGTCAATGAACTTAATTACATGACTCAGATTGTTATCATG
PREDICTED: Solanum tuberosum uncharacterized LOC102588763 (LOC102588763), mRNA
XM_006363690.1:438-452
TCACAAAATCAAACCAACTATGATGTAGTA438AATGTTGTCAATGAAGAACCTATTGATGAGAACCTGAAACATGTG
Populus trichocarpa mitotic checkpoint family protein (POPTR_0003s00880g) mRNA, complete cds
XM_002304024.2:1377-1391
ATGGTTACTGAAGAAAGAGATAGGTTGAAA1377AATGTTGTCAATGAATTGAAGAGGCCAAAGAATGATCAAGGAGGG
PREDICTED: Glycine max ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like (LOC100802233), transcript variant X1, mRNA
XM_003554912.2:1801-1815
ACTACTGGTTTAGTAGGTGCTGATCTGGCA1801AATGTTGTCAATGAAGCCGCGTTGCTTGCTGCTCGTAGAGGTAGT
PREDICTED: Glycine max ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like (LOC100802233), transcript variant X2, mRNA
XM_006603887.1:1804-1818
ACTACTGGTTTAGTAGGTGCTGATCTGGCA1804AATGTTGTCAATGAAGCCGCGTTGCTTGCTGCTCGTAGAGGTAGT
PREDICTED: Lepisosteus oculatus nuclear anchorage protein 1-like (LOC102690978), mRNA
XM_006642659.1:7033-7047
TCACTCCAGAGTCAGTTGAGTTCCATCAGC7033AATGTTGTCAATGAAAAGGAAAAGGCTTTGCAAGAGTTTGACCTG
PREDICTED: Oryza brachyantha uncharacterized LOC102716032 (LOC102716032), mRNA
XM_006652876.1:1236-1250
GATCCTGTGGACCCTGCAAAAGATGTCGAG1236AATGTTGTCAATGAAGGCAATGCTGCATCCAAAGTTCATATAGAG
PREDICTED: Oryza brachyantha auxin-responsive protein IAA17-like (LOC102705625), mRNA
XM_006654104.1:1143-1157
TATGATTGAGCACTCCTACCTACTTTGCAA1143AATGTTGTCAATGAACTGTTTGTTCGTCTACATAAATGTTCAATG
PREDICTED: Oryza brachyantha formin-like protein 5-like (LOC102716797), mRNA
XM_006658701.1:1777-1791
GATAATGGAAATCTAATGCAGGAAGTGAAA1777AATGTTGTCAATGAAGAGAGCGCTATATCTAAATTAGATAGATCT
PREDICTED: Leptonychotes weddellii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_006728302.1:2641-2655
GAACAGTGGAAACGAGCTATGGATTACTTA2641AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTAATCATG
PREDICTED: Leptonychotes weddellii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_006728303.1:2596-2610
GAACAGTGGAAACGAGCTATGGATTACTTA2596AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTAATCATG
PREDICTED: Leptonychotes weddellii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_006728304.1:2596-2610
GAACAGTGGAAACGAGCTATGGATTACTTA2596AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTAATCATG
PREDICTED: Leptonychotes weddellii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X4, mRNA
XM_006728305.1:3047-3061
GAACAGTGGAAACGAGCTATGGATTACTTA3047AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTAATCATG
PREDICTED: Leptonychotes weddellii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X5, mRNA
XM_006728306.1:3047-3061
GAACAGTGGAAACGAGCTATGGATTACTTA3047AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTAATCATG
PREDICTED: Leptonychotes weddellii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X6, mRNA
XM_006728307.1:3047-3061
GAACAGTGGAAACGAGCTATGGATTACTTA3047AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTAATCATG
PREDICTED: Saccoglossus kowalevskii hamartin-like (LOC100378717), mRNA
XM_002734995.2:1510-1524
GAATTAAAAAAGACCAGTGCTGAGTTGTTT1510AATGTTGTCAATGAACTTGAAGATTTGAAAGAGAAAGCAGCAATG
PREDICTED: Saccoglossus kowalevskii rho-associated protein kinase 2-like (LOC100371856), mRNA
XM_006812503.1:1452-1466
GGAAGCACGTAACAAAGCTTTACAGGTGGA1452AATGTTGTCAATGAAACAAAAAGAAGCCAAACTATCATCAGATTT
PREDICTED: Elephantulus edwardii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_006900681.1:2572-2586
GAACAGTGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACCCAAATTGTTATCATG
PREDICTED: Elephantulus edwardii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_006900682.1:2575-2589
GAACAGTGGAAACGAGCTATGGATTATTTA2575AATGTTGTCAATGAACTCAACTACATGACCCAAATTGTTATCATG
PREDICTED: Elephantulus edwardii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_006900683.1:2578-2592
GAACAGTGGAAACGAGCTATGGATTATTTA2578AATGTTGTCAATGAACTCAACTACATGACCCAAATTGTTATCATG
PREDICTED: Chrysochloris asiatica diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_006872311.1:2849-2863
GAACAATGGAAACGAGCTATGGATTATTTA2849AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Chrysochloris asiatica diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_006872312.1:2856-2870
GAACAATGGAAACGAGCTATGGATTATTTA2856AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Pteropus alecto diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_006913261.1:3039-3053
GAACAGTGGAAACGAGCTATGGATTATTTA3039AATGTTGTCAATGAACTCAACTACATGACTCAGATCGTTATCATG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/refseq70/AATGTTGTCAATGAA
lang : en | db : refseq70 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.122 | 0.113 | search_plus_done; http://172.18.8.74:28689/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.158 | 0.036 | search_minus_done; http://172.18.8.74:28689/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=0
0.158 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).