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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-04-24 11:29:27, GGGenome : Rabbit genome, mOryCun1.1, D3G 26.03 (Mar, 2026)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

chr1 NC_091432.1
position: 144354630-144354644
AGAAACACATTGGGAATCTTGGAAGTGGAA144354630AATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTA
chr5 NC_091436.1
position: 98207805-98207819
TCTGGGAAAGAGCTGAGGTGGTGGGGAGAG98207805AATGTTGTCAATGAAGCTAATTCAGGACAGGAGCAGGAGCGCTGG
chr7 NC_091438.1
position: 64474202-64474216
AGAGATTTTTTTCCTGCCAAGAATGATAGC64474202AATGTTGTCAATGAATGTAAAATTTTGTAAAGAAACCTATTCATC
chr9 NC_091440.1
position: 12594140-12594154
ACAGGCAATACACATATCTTGACTATCACT12594140AATGTTGTCAATGAAAACCTTTTCTGATACCTATTATGCTAATGA
chr9 NC_091440.1
position: 79835054-79835068
TGTGTGGATGAAAATGATCCTACAAGTAAT79835054AATGTTGTCAATGAAAGTGATAGTAACTAAAAGTGTTCATTTTTA
chr1 NC_091432.1
position: 115706118-115706132
AACTTTCACCACTTTAGGGCTTGGAAATCT115706118TTCATTGACAACATTTCATTCTTCTCTGTAACAAAATTTAAATTG
chr2 NC_091433.1
position: 13592240-13592254
GGTCATTCAAGAGAATGAGATTCTCCTGCC13592240TTCATTGACAACATTGGGTGAGAGATGTTGGAAAGAGTGAAGTCT
chr3 NC_091434.1
position: 100025081-100025095
GCTTCAGGTGCTTCATTTCAATCTATTTTT100025081TTCATTGACAACATTTATTAGATTTGCATGTGATTTTTGTTGAAT
chr4 NC_091435.1
position: 73543538-73543552
TTTCCTAATTACAAAAGTGTATGTTAGTTC73543538TTCATTGACAACATTAGATGAGAAAAATTGAAAAAACAAAAAAAA
chr9 NC_091440.1
position: 26096676-26096690
TTTATGAATGACTTATAATCATCCTTCCAT26096676TTCATTGACAACATTTAATCAGTATCCATATAGTATTGATTCGTC
chr10 NC_091441.1
position: 92700514-92700528
AGAATGCTACACTCCAAATACTATTGTGTT92700514TTCATTGACAACATTCACTATTACATATGCATATGAACACCAGTC
chr13 NC_091444.1
position: 59627558-59627572
GCAACTATCTCACCTCCAGGATCAGGAGGA59627558TTCATTGACAACATTAGTTCTCCTGAACCACTGAGCACTATACCC
chr14 NC_091445.1
position: 8946549-8946563
ATGAACTAGACTATTTCTTCCTTAACCCTT8946549TTCATTGACAACATTGATGACCTAAATTTTCCTCAGAAATTTTTC
chr17 NC_091448.1
position: 22470218-22470232
ATTTCTGAGCAAATCCAGTCATTGTATGAT22470218TTCATTGACAACATTTTACTATAAACTTGTAAAAGATAAAGGAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/mOryCun1.1_d3g2603/AATGTTGTCAATGAA
lang : en | db : mOryCun1.1_d3g2603 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.010 | 0.010 | search_start;
0.082 | 0.073 | search_plus_done; http://172.18.8.72:29039/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.090 | 0.007 | search_minus_done; http://172.18.8.72:29039/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=45
0.097 | 0.007 | cgi_end;

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