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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2024-03-29 04:35:31, GGGenome : Turkey genome, TGC Turkey_2.01/melGal1 (Dec, 2009)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

chr1:92508803-92508817
AGTTTGAAACGGTAGGGTGAGGAGGAGAAT92508803AATGTTGTCAATGAAATTTTTAATTTGAAAAGAGTACTAAGAATG
chr2:97820742-97820756
TAGCAGACTTGTAACCTTTATGAATCTACA97820742AATGTTGTCAATGAAATGGCTTCTAAGGATGATTAAACACCATGT
chr6:4206872-4206886
TTCTAATTACATTTATGGACATCTTATTGG4206872AATGTTGTCAATGAACTCTGAATGCTGCTGACAGTGATGTTAGAC
chr7:18748445-18748459
AAAGTCAGCACTAGCTCTGACACATTAAGA18748445AATGTTGTCAATGAAAACCTAAGTAATGAATGGCATCTTCCTTGT
chr4:18742637-18742651
TTGGCACTGCTTGCTAAAAGCAGAAGTGAT18742637TTCATTGACAACATTATTTTGAAAGTGACATTCTGCCTGGAGAAT
chr4:65773504-65773518
GTTACATTCGTATTAATACTACTGTCTGAA65773504TTCATTGACAACATTATAAAACAGTACCTTTGAGACAGAAAAGAA
chr9:14224261-14224275
TAGCTGCTCATTAGAGACTGATACACCTTA14224261TTCATTGACAACATTTGTTGCTGAGTGTTTTAATGTTGTTCAACA
chrZ:52521334-52521348
CATGATAACAATCTGTGTCATGTAATTGAG52521334TTCATTGACAACATTTAAGTAATCCATAGCTCGTTTCCATTGTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/ja/melGal1/AATGTTGTCAATGAA
lang : ja | db : melGal1 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.100 | 0.092 | search_plus_done; http://172.18.8.76:28084/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.104 | 0.005 | search_minus_done; http://172.18.8.76:28084/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=46
0.105 | 0.001 | cgi_end;

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