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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-03 12:22:50, GGGenome : RefSeq complete RNA release 228 (Jan, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

PREDICTED: Chenopodium quinoa probable serine/threonine-protein kinase PBL24 (LOC110731852), mRNA
XM_021911750.1:1607-1621
CGAACCTGTATAGAACATAATAGTATGGTG1607AATGTTGTCAATGAATTTGATCATGGAAAATAGTGTTGCAGAGCA
PREDICTED: Pelecanus crispus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_009487957.1:2863-2877
GAACAATGGAAACGAGCTATGGATTATTTA2863AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
Entamoeba invadens IP1 hypothetical protein (EIN_371760) mRNA, complete cds
XM_004259487.1:88-102
CTAACTCAACGCGATGTTGGAGAAGAGTAC88AATGTTGTCAATGAAAAGACATCAACTCCTGATGTTCAAGAACTT
Ichthyophthirius multifiliis hypothetical protein (IMG5_180790) mRNA, complete cds
XM_004027535.1:2404-2418
AACTAGTTTGGAGCACCTTTGGTATTAAAA2404AATGTTGTCAATGAATATAGAATCGATGAAAATGAAATTATACTC
PREDICTED: Saccoglossus kowalevskii hamartin-like (LOC100378717), mRNA
XM_002734995.2:1510-1524
GAATTAAAAAAGACCAGTGCTGAGTTGTTT1510AATGTTGTCAATGAACTTGAAGATTTGAAAGAGAAAGCAGCAATG
PREDICTED: Zootermopsis nevadensis transmembrane protein 8A-like (LOC110831258), mRNA
XM_022067056.1:4454-4468
AACCATGCTGTTTAATGCATGTTCTTAATT4454AATGTTGTCAATGAACTTTGCTTATCAGAAGGTTTTAAGTCACTT
PREDICTED: Acanthaster planci uncharacterized LOC110980583 (LOC110980583), mRNA
XM_022237412.1:2078-2092
CTTTTCCCGTGGAGTGAGTTTCTTGGAAAT2078AATGTTGTCAATGAATAGATAATCTTGCTTAAATGTAGCGTTCTT
Sclerotinia sclerotiorum 1980 UF-70 hypothetical protein partial mRNA
XM_001596764.1:268-282
GAACTCACCAAGTATGGTTTGGTTCACCCA268AATGTTGTCAATGAAATCACTGATACCATGAAACTCGAGACCATG
PREDICTED: Momordica charantia 40S ribosomal protein S27-2-like (LOC111017497), mRNA
XM_022293264.1:541-555
TTGGCACCGCTGTTGCAGTACGTTAATTTT541AATGTTGTCAATGAAAACTGAGTTTTGTTTGAAGTAATTCACCTC
PREDICTED: Myzus persicae cytochrome P450 4C1-like (LOC111031197), mRNA
XM_022311043.1:1653-1667
CCCAAGAGGTTGCATAGGATCCAAGTATGC1653AATGTTGTCAATGAAAGTTGCGATGTCTACGTTCTTGAGGAACTA
Bathycoccus prasinos HEAT repeat protein (Bathy14g01970), partial mRNA
XM_007509103.1:3090-3104
AAGTTGTCTTGAAACGTGCCTTGACTTCTC3090AATGTTGTCAATGAAATCCATTAATATATTTTTTAGAAATTTGGA
Candida dubliniensis CD36 conserved hypothetical protein (CD36_34915), partial mRNA
XM_002422397.1:340-354
TCTCCACCAAAACGAAAAGTTAACTTTGAC340AATGTTGTCAATGAATTATGTACAGATTTAATTTTGAAAAGTCGA
Penicillium expansum Amino acid/polyamine transporter I (PEX2_068160), partial mRNA
XM_016744087.1:817-831
TTCTCTTTTGCGGGTTATGAGAATGCATTC817AATGTTGTCAATGAAGTCCGGAATCCTACCAAAACCTTGAAGTGG
Lobosporangium transversale hypothetical protein (BCR41DRAFT_28921), mRNA
XM_022020323.1:344-358
GAAAACGTTTTTTTAAAGTTTACAATGAAC344AATGTTGTCAATGAACAACTCTCCTTCCTCCGAAAGGAGAATTGT
Parastagonospora nodorum SN15 hypothetical protein (SNOG_01710), partial mRNA
XM_001792291.1:1096-1110
AAGCACTACTACACCCTTGGAAGCTACCGA1096AATGTTGTCAATGAAGAGAATTGGCCCCGACAGAGGGCCAAGGTC
Fusarium verticillioides 7600 hypothetical protein (FVEG_03884), mRNA
XM_018891552.1:954-968
GTATATCGCAGATCCATTCGATTTCATTGG954AATGTTGTCAATGAAGAAGAGAGATCCTTATTATCTTCGCCCGAA
PREDICTED: Enhydra lutris kenyoni diphosphoinositol pentakisphosphate kinase 2 (LOC111148222), transcript variant X1, mRNA
XM_022504683.1:3328-3342
GAACAGTGGAAACGAGCTATGGATTACTTA3328AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Enhydra lutris kenyoni diphosphoinositol pentakisphosphate kinase 2 (LOC111148222), transcript variant X2, mRNA
XM_022504684.1:3200-3214
GAACAGTGGAAACGAGCTATGGATTACTTA3200AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Enhydra lutris kenyoni diphosphoinositol pentakisphosphate kinase 2 (LOC111148222), transcript variant X3, mRNA
XM_022504685.1:3260-3274
GAACAGTGGAAACGAGCTATGGATTACTTA3260AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Enhydra lutris kenyoni diphosphoinositol pentakisphosphate kinase 2 (LOC111148222), transcript variant X4, mRNA
XM_022504686.1:3199-3213
GAACAGTGGAAACGAGCTATGGATTACTTA3199AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Enhydra lutris kenyoni diphosphoinositol pentakisphosphate kinase 2 (LOC111148222), transcript variant X5, mRNA
XM_022504687.1:3198-3212
GAACAGTGGAAACGAGCTATGGATTACTTA3198AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Enhydra lutris kenyoni diphosphoinositol pentakisphosphate kinase 2 (LOC111148222), transcript variant X6, mRNA
XM_022504689.1:3051-3065
GAACAGTGGAAACGAGCTATGGATTACTTA3051AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Enhydra lutris kenyoni diphosphoinositol pentakisphosphate kinase 2 (LOC111148222), transcript variant X7, mRNA
XM_022504690.1:3195-3209
GAACAGTGGAAACGAGCTATGGATTACTTA3195AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Enhydra lutris kenyoni diphosphoinositol pentakisphosphate kinase 2 (LOC111148222), transcript variant X8, mRNA
XM_022504691.1:3051-3065
GAACAGTGGAAACGAGCTATGGATTACTTA3051AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Enhydra lutris kenyoni diphosphoinositol pentakisphosphate kinase 2 (LOC111148222), transcript variant X9, mRNA
XM_022504692.1:3195-3209
GAACAGTGGAAACGAGCTATGGATTACTTA3195AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Enhydra lutris kenyoni diphosphoinositol pentakisphosphate kinase 2 (LOC111148222), transcript variant X10, mRNA
XM_022504693.1:3193-3207
GAACAGTGGAAACGAGCTATGGATTACTTA3193AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Enhydra lutris kenyoni diphosphoinositol pentakisphosphate kinase 2 (LOC111148222), transcript variant X11, mRNA
XM_022504694.1:3199-3213
GAACAGTGGAAACGAGCTATGGATTACTTA3199AATGTTGTCAATGAACTCAATTACATGACTCAGATTGTGATCATG
PREDICTED: Nipponia nippon diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_009462394.1:2602-2616
GAACAATGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Varroa jacobsoni guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1-like (LOC111268943), transcript variant X2, mRNA
XM_022848199.1:35-49
TACGAGGAGATGCCACCATGTGGCAAGGGC35AATGTTGTCAATGAAAATAAGCAGCGGGCCAAGACGCTACGAGGT
PREDICTED: Varroa jacobsoni guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1-like (LOC111268943), transcript variant X3, mRNA
XM_022848200.1:37-51
TACGAGGAGATGCCACCATGTGGCAAGGGC37AATGTTGTCAATGAAAATAAGCAGCGGGCCAAGACGCTACGAGGT
PREDICTED: Varroa jacobsoni guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1-like (LOC111268943), transcript variant X4, mRNA
XM_022848201.1:37-51
TACGAGGAGATGCCACCATGTGGCAAGGGC37AATGTTGTCAATGAAAATAAGCAGCGGGCCAAGACGCTACGAGGT
PREDICTED: Durio zibethinus pre-mRNA-processing factor 39-like (LOC111284001), transcript variant X1, mRNA
XM_022872726.1:636-650
GTTGCTGGTTATAATTCTTCTCTAAATGGC636AATGTTGTCAATGAAGCAGGGAATGCCACAACAGTTGAGAATGGA
PREDICTED: Leptinotarsa decemlineata uncharacterized LOC111511246 (LOC111511246), ncRNA
XR_002722885.1:1483-1497
ATTTCTGTGAATGTATATAGTTTAGAAATT1483AATGTTGTCAATGAAAAGACATTTTATGAAGTAGTGCCTGCACG
PREDICTED: Copidosoma floridanum protein argonaute-3 (LOC106645840), transcript variant X1, mRNA
XM_014361790.1:1323-1337
TACGCAAAAAATAAGGATCATTTTAAGAAA1323AATGTTGTCAATGAAATCGTCGGAACATCAGTACTTACCCGGTAT
PREDICTED: Copidosoma floridanum protein argonaute-3 (LOC106645840), transcript variant X2, mRNA
XM_014361791.1:1391-1405
TACGCAAAAAATAAGGATCATTTTAAGAAA1391AATGTTGTCAATGAAATCGTCGGAACATCAGTACTTACCCGGTAT
PREDICTED: Copidosoma floridanum protein argonaute-3 (LOC106645840), transcript variant X3, mRNA
XM_014361792.1:1404-1418
TACGCAAAAAATAAGGATCATTTTAAGAAA1404AATGTTGTCAATGAAATCGTCGGAACATCAGTACTTACCCGGTAT
PREDICTED: Fulmarus glacialis diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_009574587.1:2602-2616
GAACAATGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Fulmarus glacialis diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_009574588.1:2602-2616
GAACAATGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Trichogramma pretiosum uncharacterized LOC106657121 (LOC106657121), transcript variant X1, mRNA
XM_023462954.1:1068-1082
AGCGTGCACTGTACCATGTCTTATAATTTT1068AATGTTGTCAATGAACTACGATATAAAGAGGGCAACATGAGACTT
PREDICTED: Trichogramma pretiosum uncharacterized LOC106657121 (LOC106657121), transcript variant X2, mRNA
XM_014378438.2:1058-1072
AGCGTGCACTGTACCATGTCTTATAATTTT1058AATGTTGTCAATGAACTACGATATAAAGAGGGCAACATGAGACTT
PREDICTED: Trichogramma pretiosum stress-associated endoplasmic reticulum protein 2 (LOC106659825), mRNA
XM_014382538.2:972-986
AAAAAGTATATATATTATATAAATAAAGAA972AATGTTGTCAATGAACTTTTAGTTTGACTTGTAAAAACCAATATA
PREDICTED: Pteropus vampyrus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_011378685.2:3059-3073
GAACAGTGGAAACGAGCTATGGATTATTTA3059AATGTTGTCAATGAACTCAACTACATGACTCAGATCGTTATCATG
PREDICTED: Pteropus vampyrus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_023523665.1:2572-2586
GAACAGTGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACTCAGATCGTTATCATG
PREDICTED: Pteropus vampyrus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_023523667.1:3056-3070
GAACAGTGGAAACGAGCTATGGATTATTTA3056AATGTTGTCAATGAACTCAACTACATGACTCAGATCGTTATCATG
PREDICTED: Pteropus vampyrus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X4, mRNA
XM_023523668.1:2572-2586
GAACAGTGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACTCAGATCGTTATCATG
PREDICTED: Pteropus vampyrus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X5, mRNA
XM_023523669.1:2572-2586
GAACAGTGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACTCAGATCGTTATCATG
PREDICTED: Pteropus vampyrus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X6, mRNA
XM_023523673.1:2572-2586
GAACAGTGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACTCAGATCGTTATCATG
PREDICTED: Pteropus vampyrus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X7, mRNA
XM_023523676.1:2572-2586
GAACAGTGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACTCAGATCGTTATCATG
PREDICTED: Pteropus vampyrus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X8, mRNA
XM_023523682.1:2569-2583
GAACAGTGGAAACGAGCTATGGATTATTTA2569AATGTTGTCAATGAACTCAACTACATGACTCAGATCGTTATCATG
PREDICTED: Pteropus vampyrus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X9, mRNA
XM_023523685.1:2572-2586
GAACAGTGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACTCAGATCGTTATCATG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/refseq/AATGTTGTCAATGAA
lang : en | db : refseq | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.119 | 0.110 | search_plus_done; http://172.18.8.137:27498/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.156 | 0.037 | search_minus_done; http://172.18.8.137:27498/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=0
0.156 | 0.000 | cgi_end;

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