GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-04-25 05:17:13, GGGenome : RefSeq complete RNA release 210 (Jan, 2022)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

PREDICTED: Saccoglossus kowalevskii hamartin-like (LOC100378717), mRNA
XM_002734995.2:1510-1524
GAATTAAAAAAGACCAGTGCTGAGTTGTTT1510AATGTTGTCAATGAACTTGAAGATTTGAAAGAGAAAGCAGCAATG
PREDICTED: Saccoglossus kowalevskii rho-associated protein kinase 2-like (LOC100371856), mRNA
XM_006812503.1:1452-1466
GGAAGCACGTAACAAAGCTTTACAGGTGGA1452AATGTTGTCAATGAAACAAAAAGAAGCCAAACTATCATCAGATTT
PREDICTED: Elephantulus edwardii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_006900681.1:2572-2586
GAACAGTGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACCCAAATTGTTATCATG
PREDICTED: Elephantulus edwardii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_006900682.1:2575-2589
GAACAGTGGAAACGAGCTATGGATTATTTA2575AATGTTGTCAATGAACTCAACTACATGACCCAAATTGTTATCATG
PREDICTED: Elephantulus edwardii diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_006900683.1:2578-2592
GAACAGTGGAAACGAGCTATGGATTATTTA2578AATGTTGTCAATGAACTCAACTACATGACCCAAATTGTTATCATG
PREDICTED: Chrysochloris asiatica diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_006872311.1:2849-2863
GAACAATGGAAACGAGCTATGGATTATTTA2849AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Chrysochloris asiatica diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_006872312.1:2856-2870
GAACAATGGAAACGAGCTATGGATTATTTA2856AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Lipotes vexillifer diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_007449903.1:2572-2586
GAACAGTGGAAACGAGCTATGGATTATTTA2572AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Lipotes vexillifer diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_007449904.1:2581-2595
GAACAGTGGAAACGAGCTATGGATTATTTA2581AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Lipotes vexillifer diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_007449905.1:2584-2598
GAACAGTGGAAACGAGCTATGGATTATTTA2584AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
PREDICTED: Merops nubicus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), partial mRNA
XM_008945234.1:2177-2191
GAACAATGGAAACGAGCAATGGATTATTTA2177AATGTTGTCAATGAACTCAATTACATGACACAGATTGTCATCATG
PREDICTED: Pygoscelis adeliae Kv channel interacting protein 4 (KCNIP4), transcript variant X3, mRNA
XM_009324066.1:238-252
TATAGAGGTTTCAAGAATGAAGATCCTTCA238AATGTTGTCAATGAAGAAACCTTCAAAGAGATTTACTCTCAGTTC
PREDICTED: Pygoscelis adeliae Kv channel interacting protein 4 (KCNIP4), transcript variant X4, mRNA
XM_009324067.1:226-240
TATAGAGGTTTCAAGAATGAAGATCCTTCA226AATGTTGTCAATGAAGAAACCTTCAAAGAGATTTACTCTCAGTTC
PREDICTED: Pelecanus crispus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_009487957.1:2863-2877
GAACAATGGAAACGAGCTATGGATTATTTA2863AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Nipponia nippon diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_009462394.1:2602-2616
GAACAATGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Cuculus canorus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_009559909.1:2602-2616
GAACAGTGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Fulmarus glacialis diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_009574587.1:2602-2616
GAACAATGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Fulmarus glacialis diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_009574588.1:2602-2616
GAACAATGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Cariama cristata inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like (LOC104155152), partial mRNA
XM_009707050.1:835-849
GAACAATGGAAACGAGCTATGGATTATTTA835AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Nicotiana sylvestris uncharacterized LOC104240473 (LOC104240473), mRNA
XM_009795319.1:444-458
TTAGTGTTTTTTGGGGGCTAAAACTAAGTT444AATGTTGTCAATGAAGCTGTAAGGATATCACTCCTTGTGTGACAA
PREDICTED: Nicotiana sylvestris putative pentatricopeptide repeat-containing protein At5g37570 (LOC104247474), mRNA
XM_009803497.1:1173-1187
GCCCAATGAAGCTCTCAAAATTTTCCATGA1173AATGTTGTCAATGAATGTTAGGCCAGATGAGTTTATAATGGTAAG
PREDICTED: Apaloderma vittatum inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like (LOC104277017), partial mRNA
XM_009873526.1:1666-1680
GAACAATGGAAACGAGCTATGGATTATTTA1666AATGTTGTCAATGAACTGAATTACATGACACAGATTGTTATCATG
PREDICTED: Charadrius vociferus mitogen-activated protein kinase kinase kinase 19 (MAP3K19), mRNA
XM_009895855.1:478-492
AGAACAATTCATCTTGCTCCTCTAGAGGAT478AATGTTGTCAATGAAAGCACCAACATCAGAAATATTTTGAATATT
PREDICTED: Charadrius vociferus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_009891667.1:2863-2877
GAACAATGGAAACGAGCTATGGATTATTTA2863AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Charadrius vociferus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_009891669.1:2863-2877
GAACAATGGAAACGAGCTATGGATTATTTA2863AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Haliaeetus albicilla diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_009927724.1:2913-2927
GAACAATGGAAACGAGCTATGGATTATTTA2913AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Haliaeetus albicilla diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_009927733.1:2913-2927
GAACAATGGAAACGAGCTATGGATTATTTA2913AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Haliaeetus albicilla diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_009927742.1:2913-2927
GAACAATGGAAACGAGCTATGGATTATTTA2913AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Haliaeetus albicilla diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X4, mRNA
XM_009927749.1:2913-2927
GAACAATGGAAACGAGCTATGGATTATTTA2913AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Haliaeetus albicilla diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X5, mRNA
XM_009927757.1:2913-2927
GAACAATGGAAACGAGCTATGGATTATTTA2913AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Haliaeetus albicilla diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X6, mRNA
XM_009927764.1:2913-2927
GAACAATGGAAACGAGCTATGGATTATTTA2913AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Haliaeetus albicilla diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X7, mRNA
XM_009927771.1:2913-2927
GAACAATGGAAACGAGCTATGGATTATTTA2913AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Haliaeetus albicilla diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X8, misc_RNA
XR_719222.1:2913-2927
GAACAATGGAAACGAGCTATGGATTATTTA2913AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Opisthocomus hoazin diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_009936412.1:2602-2616
GAACAATGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Leptosomus discolor diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_009960983.1:2602-2616
GAACAATGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Nestor notabilis diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_010009506.1:2602-2616
GAACAATGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Tauraco erythrolophus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_009981873.1:2845-2859
GAACAATGGAAACGAGCTATGGATTATTTA2845AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Chaetura pelagica diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_010007212.1:2602-2616
GAACAGTGGAAACGAGCTATGGATTATTTA2602AATGTTGTCAATGAACTAAATTACATGACACAGATTGTTATCATG
PREDICTED: Buceros rhinoceros silvestris diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_010142415.1:2834-2848
GAACAATGGAAACGAGCTATGGATTATTTA2834AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Pterocles gutturalis inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like (LOC104458323), partial mRNA
XM_010086810.1:957-971
GAACAATGGAAACGAGCTATGGATTATTTA957AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Pterocles gutturalis mitogen-activated protein kinase kinase kinase 19 (MAP3K19), mRNA
XM_010083056.1:337-351
AGAACGATTCATCTTGCTCCTCTAGAAGAT337AATGTTGTCAATGAAAGCACCAACATCAGAAATATTTTTAATATT
PREDICTED: Chlamydotis macqueenii inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like (LOC104473681), partial mRNA
XM_010122701.1:835-849
GAACAATGGAAACGAGCTATGGATTATTTA835AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Colius striatus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), mRNA
XM_010198742.1:2839-2853
GAACAGTGGAAACGAGCTATGGATTATTTA2839AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Colius striatus mitogen-activated protein kinase kinase kinase 19 (MAP3K19), partial mRNA
XM_010201274.1:475-489
AGAACAATTCATCTGGCTCCTCTAGAGGAT475AATGTTGTCAATGAAAGCACCAACATCAGAAATATTTGGAATGTT
PREDICTED: Tinamus guttatus inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 (LOC104568552), mRNA
XM_010215453.1:2584-2598
GAACAGTGGAAGCGAGCTATGGATTACCTG2584AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Phaethon lepturus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), partial mRNA
XM_010294048.1:2085-2099
GAACAATGGAAACGAGCGATGGATTATTTA2085AATGTTGTCAATGAACTCAATTACATGACCCAGATTGTTATCATG
PREDICTED: Balearica regulorum gibbericeps inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like (LOC104633520), partial mRNA
XM_010299754.1:835-849
GAACAATGGAAACGAGCTATGGATTATTTA835AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Haliaeetus leucocephalus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X1, mRNA
XM_010565041.1:2913-2927
GAACAATGGAAACGAGCTATGGATTATTTA2913AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Haliaeetus leucocephalus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X2, mRNA
XM_010565043.1:2913-2927
GAACAATGGAAACGAGCTATGGATTATTTA2913AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG
PREDICTED: Haliaeetus leucocephalus diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2), transcript variant X3, mRNA
XM_010565044.1:2913-2927
GAACAATGGAAACGAGCTATGGATTATTTA2913AATGTTGTCAATGAACTCAATTACATGACACAGATTGTTATCATG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/refseq210/AATGTTGTCAATGAA
lang : en | db : refseq210 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.207 | 0.199 | search_plus_done; http://172.18.8.70:28891/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.262 | 0.055 | search_minus_done; http://172.18.8.70:28891/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=0
0.262 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).