GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-05-05 14:35:49, GGGenome : Rhesus spliced RNA, RefSeq on Mmul_10/rheMac10, D3G 23.02 (Feb, 2023)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

XR_001445025.2|LOC106998534;106998534|chr5:146514149:146527572:-|spliced::chr5:146514149-146527572(-)
position: 218-232
TTAATATTAATATTAAATGGATGCCCACAA218AATGTTGTCAATGAAAATCTGTGTTCAAAGCGATAATATATTCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/rheMac10_RefSeq_spliced_d3g2302/TTCATTGACAACATT
lang : en | db : rheMac10_RefSeq_spliced_d3g2302 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.086 | 0.077 | search_plus_done; http://172.18.8.78:28952/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.094 | 0.008 | search_minus_done; http://172.18.8.78:28952/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.095 | 0.001 | cgi_end;

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