# [ GGGenome | 2024-04-25 02:58:19 ] # database: Rat genome, RGSC 5.0/rn5 (Mar, 2012) # query: TTCATTGACAACATT # count: 5 # query: AATGTTGTCAATGAA # count: 8 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins chr2 + 60985890 60985904 ACAACAATAAAAACCAAGACCTTTGTTACACGTACCTGAAGTCTTACAACAGCTAAGTCCAAAGGAACAGTTTTCAAAATCTTTTGCCTGTATAGACTTTTTCATTGACAACATTAAACTGTATGACATGCAAAAAATAACAGGTTCTATGGGCTGCATCATAATGTCCAAATTCATTGAAGGGGATAAGGGATAGAAATGAACTTTTATCATCA 60985790 60986004 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr2 + 77241554 77241568 CAGGAGGTGGCCACTTCATATCCCCATGCTAGGAGTCTCAGCTAGAGTCATCCCCAGAAACTCCATGGCGCCTCTCCCATTTACATTTAGTTTTAAGTAATTCATTGACAACATTTTTTGCATTGTTCAGCCCTTTACCTGTATTCATTGTTGTATTTCAGTGCATATAGCCTCAGATTATATCTACACGCACATTAATAACTAGACTTACCATC 77241454 77241668 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr2 + 111132974 111132988 CCATGTGCTTACCAGCACCAAAACAACCCTGCCTCTTTCTGGTACTGTTCACCTTCTGCAGGAAGCTAGTTGAATGAAAGGTCAGAGTTCAAGGTGTGATTTCATTGACAACATTAAATATTTACTGAATCTTAAATCTTATCCTGGCAGCGAACCAGGTTACTGTCCTTGCTTGGTGGGTTTGTACAGAAATGTCCCTGCTTTGGAAAGTATTT 111132874 111133088 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr14 + 32165809 32165823 TTGAAAGTGGGTATAAATAATGGCCCTAAACTCTGCCTATCACAGGCCACCATGTCAGACTTTTAATCCAGAAGCTAATAGTGCAATCGCCATGGTCTCCTTCATTGACAACATTAACAGCTGTAATAAAATCAAGATATTGGCAGTGCGCAAGCTGGGGCATCTGTACTCAGTGAATGTAGACACTGACACAGTTTCACCGTTAGTCCAGCACT 32165709 32165923 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr18 + 24411369 24411383 AAAAGTATGAAGTTGTTGCCTAAATCTCTGTGGTCCCGCCATGGGCACTCATTTGGCTTTGGAATAAACTACATTCCTTACTCCTCTGACAGCAGTTTCTTTCATTGACAACATTCAGGCTATCAGGCCTGATGTTGAGGTCCTTGAAGCATTTTGGAGTTGAGTTTGTGTAGACTGAGAGCTAAGGGTCTAGTTTCACTCTTTAACATGTAGTT 24411269 24411483 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr2 - 84356655 84356669 GAGGACATTGTTGTAATAAACTTGACCTTGTAGTATCCTTATAATAGCTTTGTGGGAAGAATATGGAATAATTTGGAGTTGGGGTCTATAGCTGCCATAGAATGTTGTCAATGAAACCTAATGGGTTGTTATGGTGAAAGTTCAGACTGGGAGAGGGATGTGAAGAGCAAAGACTGTACTCATGAAATCTTGGAAGAAAACAAGGAAAAAACTGG 84356555 84356769 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr2 - 258257794 258257808 GTGAATAAAACATGGGGGAAATGACCAGATCTTTTAATTATGGCCACAGCAAAAGGAAAAAAAATATACCATACCAAGTAAAAAAACAAAAAAACAAAAAAATGTTGTCAATGAAGGTGTGGAAGAAAATTTTCCAAACCTAGTGAAAAGGATGCCTATCTGGGAACAAGCAGCACAGAGAAATCCTAAAAAGGGACCAGAACTTAAACTCTCCA 258257694 258257908 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr3 - 36451894 36451908 TATGTCATAATATTTTTAAAATATGGAAATGAATTAATTTTAAATTTTTTAATGGTGCGTTTCAAAATATCTACTTATTCATTCATGTATGTGGGTTTCAAATGTTGTCAATGAACACTGCTGCTTCATCGAACACATGAAAAATGTTAATCAGATTTTATTTTAAAACCTTTATATTTCCTGAATACTTTCTGAAATAAATAAAGTTATTCCAA 36451794 36452008 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr4 - 231514733 231514747 TGTGTTGTTGGCTAGAAAGACTGTCGTTTCTCCCATCAAATCTGCAACTTTGAAGAAGGTCAGTCGCTCACACACGAGTGTCTATCTCTCTATTTTCTTTAATGTTGTCAATGAAAATACCATACCGTCTTGCTTAGCGCAGTTTCTGATAAGTCGTGAAACCGTGTAGCTTGCACCTATCCAACTTCCTTCCTTTAAAACTTCCGTCTGGGGGC 231514633 231514847 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr5 - 101992139 101992153 AAACAACAAAAAAACACACACACAATTTGCTAATACTAGCAAAGACAATCTTCATTGTCAACACAATGAGCATTGTCAACAGTTATACATTTGAAACTTTAATGTTGTCAATGAAATAGATCTGTTCATCAAATAATCTGAAAAAATCATAACAAAGAAATGCATTCACTGAACTTATATATCAAAAAATAAAATTTCTTACAAATGGCATTTAA 101992039 101992253 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr5 - 102066527 102066541 AAACAACAAAAAAACACACACACAATTTGCTAATACTAGCAAAGACAATCTTCATTGTCAACACAATGAGCATTGTCAACAGTTATACATTTGAAACTTTAATGTTGTCAATGAAATAGATCTGTTCATCAAATAATCTGAAAAAATCATAACAAAGAAATGCATTCACTGAACTTATATATCAAAAAATAAAATTTCTTACAAATGGCATTTAA 102066427 102066641 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr6 - 78769998 78770012 GGTGATTTTTAGATGTCCCAGGAAAAAAAATAATTAGGCCATGAACCAAAATGGCAATCAATGTCTATTCCCATAGATTAGTCATAGATAGCAGCTACTAAATGTTGTCAATGAAGTTTCTACACAAATGGTAATTAGGCAATTTTGAAACCACACCAGGTTATGATGGACAGGAGTTTGGCGCATTGTTTTGAAGAATGCACTGAGACTTTGAA 78769898 78770112 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr7 - 112559627 112559641 TCTTTATTAGCTTTTAATTGTTACTAATTATATGTCTAAAGAATCTACGTGTGAATCGTTCTTTACTTTCTCTCTTATGTATCCATTGTCCAATTTCTAGAATGTTGTCAATGAACTGTGTCTTTGAGGCAGTTTCTTTTTGAGCTATCTGACAGCATACTATCTTTCTGCCTTGAGTGGATTGTTTTATTATTCACCTAAAACAATCTCACATT 112559527 112559741 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0