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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2024-11-23 22:21:48, GGGenome : Shrew genome, Broad/sorAra2 (Aug, 2008)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

JH798148:3058404-3058418
ATCACTCTGAAGAGAGTTTGCAGCAAGTTA3058404AATGTTGTCAATGAAGTTTCAGGGGCTCCAAGCTTTTCAGTGTAT
JH798156:23453156-23453170
AAACATTCTATCGATGGGGCATGTGCTCTG23453156AATGTTGTCAATGAACCTAGTGGGAGTCTTGTTTCTGTCCTGTTA
JH798164:9154339-9154353
GGTGATGAACCAGTTGTTGTATTCCTCATC9154339AATGTTGTCAATGAAGGCATCTTCCCACGTTGCCACAATAGTGCC
JH798165:3837226-3837240
GTGCTGAACCAGTTGATTGTATTCCTCGTC3837226AATGTTGTCAATGAAGACATCTTCCCATGTTGCCACAATAGTGCC
JH798165:14440772-14440786
TTAATATTAATATTAAATGGATACCCACAG14440772AATGTTGTCAATGAAAATCTGTGTTGAAGTGATAATGTATTCTAG
JH798166:16503089-16503103
AACATCCTTCTTTTCACCTGGGGTGACATT16503089AATGTTGTCAATGAAATCAAATGTAGTTTCAACCTATCATGCTTT
JH798169:21407599-21407613
GGGCTGAACCAGTCAATCATATTCCTCATC21407599AATGTTGTCAATGAAGGCATCTTCCCACGTTGCTGCAATAGTGAT
JH798176:23456487-23456501
GTGCTGAACCAGTCGATCGTATTCCTCATC23456487AATGTTGTCAATGAAGGCATCTTCCCATATTGCCAAAGAGCTCCC
JH798186:7739191-7739205
GTGCTAAACCAGTTGATCATATTTCTTGTC7739191AATGTTGTCAATGAAGACGTCTTCCCACGCTGCGGCACTAGTGCC
JH798190:7789266-7789280
ATCAATTTGACGTGCAGAACCGAAGCTTTA7789266AATGTTGTCAATGAAATTACATCCCTGTAACTGTCCTGTTGAAAG
JH798214:7846413-7846427
GTGCTGAACCAGTCCATCACATTCCTCATC7846413AATGTTGTCAATGAAGGATTCACATATTTCTGCAGTCAGACCAAA
JH798236:2040381-2040395
TGTAACGTGAAGTATATAAATCAACTTTGG2040381AATGTTGTCAATGAACATAGATATAGTTGGTTGGTCATGATAAAT
JH798255:4700800-4700814
GTGTTGAACCAGTTGATCGTATTCCACATC4700800AATGTTGTCAATGAAGGCATCTTCCCATATTGCTGCAATAGTGCC
JH798280:1671565-1671579
GTCCAGAAAAAAGTGCTACCACGGAAAAAT1671565AATGTTGTCAATGAAGGTCTGGAAACACTGGCCTTAAGGAAGGGC
JH798150:13233852-13233866
ATATTATTCAGTAGCATTCAAAGAAAATGA13233852TTCATTGACAACATTGTAGCATCAAACATCTTGCATTTCCTTTAT
JH798155:28556841-28556855
GGCACTATTGCAGCAACGTGGGAAGGTGCC28556841TTCATTGACAACATTGATGAGGAATATGATCAACTGGTTCAGCAC
JH798167:11207135-11207149
GGCACTACTGCAGCAATATGGGAAGATGCC11207135TTCATTGACAACATTGATGAGGAATACGATCAACTGGTTCAGCGC
JH798198:6466443-6466457
GGCACTATTTCGGCAACGTGGGAAGATGCC6466443TTCATTGACAACATTGACCAGGAATACGATTGACTGGTTCAGCAC
JH798199:12564045-12564059
TTTTATGACTGTATTTTCACTAATCACTAT12564045TTCATTGACAACATTATGTTTGTTTTTTGGGCCATGCTCAGAAAT
JH798200:4938768-4938782
AACCTTACAATACATACAACTGCTAACTTT4938768TTCATTGACAACATTTTGGAAGGAAAAACACGTGGTAACTGATTA
JH798201:13085702-13085716
CTTTTTTGAATGGATAAAACAAATGACCTA13085702TTCATTGACAACATTTTGCCCAACAGGATGTCACAAGATCAGGAT
JH798232:744778-744792
GGAACTATTGCGGCAATGTGGGAAGATGCC744778TTCATTGACAACATTGACGAGGAATATGATCTACTGGTTCAGCAC
JH798233:45170-45184
GGTACTACTGCAGCAATATGGGAAGATGCC45170TTCATTGACAACATTGATGAGGAATACGATAGACTGTTTCAGCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/sorAra2/AATGTTGTCAATGAA
lang : ja | db : sorAra2 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.084 | 0.075 | search_plus_done; http://172.18.8.77:28059/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.093 | 0.008 | search_minus_done; http://172.18.8.77:28059/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=36
0.095 | 0.002 | cgi_end;

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