# [ GGGenome | 2024-04-29 09:19:58 ] # database: Squirrel genome, Broad/speTri2 (Nov, 2011) # query: TTCATTGACAACATT # count: 6 # query: AATGTTGTCAATGAA # count: 14 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins JH393279 + 49282503 49282517 CTTTTTAAAGCACTCATTCAAATTATTATCTAATACCAACTATTTTTTTTCATTCATGATCCTGTTGTAAAATATCATAACATTTATCAAAAATGTTTTTTTCATTGACAACATTTAATACACTAGTTGGGTAGTTTTCAAGAGTCCACAGTAATTGAAATTTTATTTGCTTTAAAAGTCAGAACAGATATTTCTGTTGTAATTTTAAAAATCAC 49282403 49282617 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 JH393333 + 1358821 1358835 ACTTCAAACTATTAATCTGGGAACATAAACAAATCAAGAACTCTGTTACCTTGTTAGGATCCTCATAAAGCATGATAACAATCTGAGTCATGTAGTTGAGTTCATTGACAACATTTAAATAATCCATGGCTCTTTTCCACTGTTCATCCTTTGATTCCTGAACAAAATACAGTAAGTACTTTCTTATATTCTATTACTTAAAATTAACTTCATTG 1358721 1358935 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 JH393387 + 967190 967204 TTCTTTGACTTGTTTCTACATTCACTTATTTGCCAGTTATTAGTCTGTCTCTCCAAAAGAGAATACAGATTTACCAAGAATAGGGAACTTCTTTGCCTTGTTCATTGACAACATTCCTCAGATTTACAATAGTGCTCAACAGTTACCTGTTGAATAGGTGAACAATCAGCTTTTGTACCCTAGGGAAGTTTCCCAGGGCCATTTTGAACAACATG 967090 967304 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 JH393399 + 1612914 1612928 GCTCAAGAGTAAACCATCAAATTTCCGATTAATAAATTGAAAAACAAAAACCTTTTAAAGACATCTACACTCTTTAACCTATAAAGAATGTAACTGTTTATTCATTGACAACATTTTTACTTAAATGGCAGATAAAACAAAAAAGGGAAAGGATTAGCGGGTAGGGAGAGGAAATGGGAAGGAGAGATACTAGGGTCGGAATTAGAACAAGATAT 1612814 1613028 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 JH393408 + 788140 788154 GGCATGCTTTTTGAGTTGGAAGGTGATGATAAAGTTTTGCTCTGCATATGGAATCAGACACATTCCAATTAATTTTCCCAATGAGCCAATAAGCTGTAGATTCATTGACAACATTAGCTTGTAAGCTAAACCTCTCTTTCTCAGGAAGCATTTCCAAAATCACTTTAGTCATCTATTATTGGTGAAAGTATCTGAAACAGAAAAATTGTTCCAGG 788040 788254 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 AGTP01148074 + 41 55 TTGGTACATCAGTGAAATACACCCTGACTTTATGCCAACTTTCATTGACAACATTCTATAGTTACATTTTCAGCAGTCTATGAAAATGTTTAAGATGAATATTTGGGAAGGTCAAAATCAAAATTGTAAGAGGCTGCAACTTCTAAATTATAAGA 1 155 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 JH393280 - 44953479 44953493 GTAGTAGATGATTTGGCATTTTTTATAAATATTTAATAATATTTTGTACCTGATCAATATTTAATAAGACAATTTTAGAAAAAAAAACAAGAACTCCAAAAATGTTGTCAATGAAAAAAACTGGAAGGGGAATCTAGAAAGGGAAAAAATAGACCTCACATTAAATCTAGGCTACATTACAAATGACGTCCCAATTTCAAAAGTTTTAAAACATA 44953379 44953593 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393283 - 7548241 7548255 TAAATTTTTTCCAAGCAAATTGGAAAAAATAATAATCTCTTAATACTATTACAGTAATTCTGATGAAAATGCCTGTTTTTCATATGCATATGTAATAGTGAATGTTGTCAATGAAAACACAATGGTATTTGGAGTGCAGCATACTGGAAAAGGTTGGCAAAGTTATTAATACTGAGTGTAATTGTCTTCCAAGTGCTTGGATTAATTCATAGGAA 7548141 7548355 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393284 - 13443493 13443507 TGGCCTGGAAGTGGGGGAGGGGGAAATTCTATGCAAAGGCACGGGGAGCCAAATCCACAGATATCCTCTTCTGGGCTGAGGGTGGAGGATGAGAAAAACAAATGTTGTCAATGAAACCGAGAAGAAGGGGAGAAACTTCGAATATCCACATCCCAACCATCTCATGAGACCACAAATAATAAGATACTATCTGAATTTTAGTGTTGGAAGGACCT 13443393 13443607 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393293 - 18081227 18081241 AGATGCAATCTTCCAGATTTAGAATTTGGAAATTCTAAAGGACAAACGATGTTATTTTTTTTTTTTATAAATAAATAGCAAAGAGAAAAACAGGAAGGGAAATGTTGTCAATGAAAGAAAACTTAAAGGAACTGTGGCATTTGCAGCTGATGATCTGTCCATGTTCCCTCCATTCTTCTGTTTTAAAATTTTATGTAATTAAAAAATTTTAGCTG 18081127 18081341 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393305 - 11159542 11159556 CACTTGCTCAACTCTGATTATAGCCATATGAAGACCCAGTATTGTCAGACTTCTAAAAATTAAAACAATTTTTTTAAAATTAACAAATGCCCATTTTAAAAATGTTGTCAATGAAGTGAATATGGAAAAATAAGAATTCTGTGGATCAGTACTATATGGGCCAAGCAAACATACTGAGATTAAATTCTATCCATGCCCTCCTTTTACTTTCCCAC 11159442 11159656 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393323 - 4557295 4557309 ACACAGGTGAAATACAATCCTTATATGAAAAAAATGCTCTTACATGTTTTGGAAGTAAAACATTAGATTTATAATTCAGTTACATCATATAATTATATTTAATGTTGTCAATGAATAGAGATCCACTTAATGATTCTAAATTGAGAAAATAGTTTTTGACATCTATTTCAATATTTTGGCTGTTTTCCTGACAAGTAAAATTTCAAAGATAATTC 4557195 4557409 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393333 - 7093567 7093581 AAACCCTTCCAAATCAGTGACATTTCTGTCTACAAACCTACCAGGCAGGGACAGTAACTTGACTCAGTGCCAGAATAAAGTTGAGTTTCAGTAAATATTTAATGTTGTCAATGAAATGTGAAATAATTTCTTTAAATTCTGACCTTTGATTCAGCTAGTTTCTTTGCAGAAGGTAAACAGAAGCAAGAAGAGGTAGGACTATTTTTGTCCTGGTG 7093467 7093681 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393341 - 5747397 5747411 AATACTCAAACTTTGGTATTTACTCAAGGTTTTGATGCCTACTCAGCAAGGAAGGCAAATGCAGACTTTCACAGCTAGGAAGAACATATGACTATGGAATAATGTTGTCAATGAATTTTTGCCCTCAAACCTTAAATCCTTAAAAATCTCTCTAGAGATCTCTTTCTGACTCCAGCCCTGAAGAATGATTATATATTTTTCATTCAGCATTGTTT 5747297 5747511 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393375 - 2484372 2484386 AGAACTAGTAACTTCATTCATTAAGATCACAGCTGTATTTCCATTGACAGCTCTAATCATTTTTTTGGAGCTAAAATTGTCCACATTTATTAACTATTTTAATGTTGTCAATGAATAATGATTTTTATATTAGGATTTCATAATCTCAATTTATAGCAGGGATCCGAAGCTAGGTTAGTATTCTCAAAAATTGGTAACTATAATGAGAGGATCAG 2484272 2484486 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393382 - 401757 401771 GATTATTTTTAATGCAACCTTTTTATACTTCTACTTTTTTGTGAAGATTCAACCATTTTGTCTCTACATATTAATAAAATGGTACTAACAAATATCAATGAATGTTGTCAATGAATTCCATGGATATTATGGGTGATGGTCAAGAGGTGTTTTGGGTGGCGATGGTTTGTGTTATTTTATAGGATTTGTTTTTCCATAGGTAGATGTAAGCAGTC 401657 401871 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393429 - 2650992 2651006 TTTCTTATCTACACAATACTACCATTCAAATTTAGATGCCATTTTCTCCTACTTCCCAAAGCATGAGGAGGAGTAGTGAGAATGTACATCAGGAAACATAAATGTTGTCAATGAAAAATGGGGAGACCCTGTTATATTGGGGGTAGTTAGGACTACATGTTAAACATGATTCTAGTGAAGTTAGTTATAAAGCAGATATCAGAGATGAAGATTTC 2650892 2651106 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393519 - 2254507 2254521 CCGATCATTCAAGAAGAAGTGTCTCATTGATACCATAGTTTCATTTACCTCCTGATATAAATCCAGGCATTTCTACAGGTTATGTGCCCCCTTTCTAAGAAATGTTGTCAATGAATGAAAATTCAAATCAGAATGAATAAATCACCTCCAGTCTTGGGAAAAATTATTTTCCTGCTTCTGATGGGATGATAATACTGTCCCATCTATGAAGCCCA 2254407 2254621 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393526 - 941929 941943 ATTAAGTAATTAGGAAAATTGAAGGCTATAAAAGAAATAAAGGTAAAATAGTCACTGAGTATTCATGTAGCAATTAAAATGGCTTGAAGCCATTGAAGGTAATGTTGTCAATGAAGACAGTATACCATGGGTCCCACCTCTGAGCTATAGCCAATGCCAATTACTTCTCCCTGAAGTAAGTAACTTAGTCAAAGAAGCCATGTCCAAATTTATTA 941829 942043 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JH393539 - 1269175 1269189 CTTAAAACCTGCTAAATAGAATTCCCGACTTTCATAGCATAATGAAGCTTGGCATCTGGCTGTTCTGAACTGATGCTTTAAACAACAACAAAAATCTTCAAATGTTGTCAATGAAAGCCAACCTATTCCACAATTATAAATATTATTGTTGCTTTCATATCCCACCCTAACCACCTGTATATTGCAACACTGTATATCCCAACTATTTTATGATC 1269075 1269289 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0