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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2024-04-20 22:17:27, GGGenome : Alpaca genome, Vicugna_pacos-2.0.1/vicPac2 (Mar, 2013)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KB632435:6904866-6904880
GCCTGTTTTTCATATGCATATGTAATAGTG6904866AATGTTGTCAATGAAAACACAATAGAATTTGGAGTGCAGCATACT
KB632448:760527-760541
ACACCATGTTTTATTCACCACTAAGAAAAA760527AATGTTGTCAATGAAACTAGGATATGCCACTGTTTTTTAAGGCAT
KB632511:2830884-2830898
GAACAGTGGAAACGAGCTATGGATTATTTA2830884AATGTTGTCAATGAACTCAACTACATGACTCAGATTGTTATCATG
KB632675:2251469-2251483
ATCCTGTGTCTGTCAGAGTCATTTCAATGC2251469AATGTTGTCAATGAAACAGAAAGCCTCACCTTTGTGTCCTAAAAG
KB632825:105259-105273
GAAAATCAGGTGAACAGATATTATTATTCT105259AATGTTGTCAATGAAGAAAGCAGGAAGCTAGTAACTGGTGGAGCC
KB632439:14070665-14070679
TTAAGTGCTATTAAAGCATGTATGTCTTAG14070665TTCATTGACAACATTGTTTTTTCTTCTTCCTAACTGGTATAAAAT
KB632466:6964034-6964048
GACAGTTTGCAGTTCTTAGTTGTTAACTGA6964034TTCATTGACAACATTTGCAGCTTAAGATCTCCAGGTGATTCAGCT
KB632536:4284494-4284508
CTAGAATATATTATCACTTAGACACAGATT4284494TTCATTGACAACATTCTGTGGGCATCCACTTAATATTAAGCCAAG
KB632549:1682154-1682168
ATTGACCCTTTTTTATGTTGTAATAACTCT1682154TTCATTGACAACATTCCTTTCTCTGAAGTCTCTGTCTGAAATTAA
KB632595:2104572-2104586
GAAACAAAGGTTAGAGTTTAAGGAAACTAT2104572TTCATTGACAACATTAAATATTTACAAAATTTCAACTTTATCTCA
KB632601:3970798-3970812
GCCAACTGTGAGGTTTTCTCAGGCTAGTTG3970798TTCATTGACAACATTGGATTCCAAATGTCTCTCTTATGGCCAAAC
KB633254:27202-27216
AAGAAAAGAGTCAAGATTTTACTTACAATA27202TTCATTGACAACATTTCCTTCCATAATAAGACTACATAAAACCAA
ABRR02178701:967-981
CGTGATAAGGAGGGACAAGATGTGCTTCTG967TTCATTGACAACATTTTCCGTTTCACCCAGGCCGGTTCAGAAGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/ja/vicPac2/AATGTTGTCAATGAA
lang : ja | db : vicPac2 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.081 | 0.072 | search_plus_done; http://172.18.8.78:28021/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.086 | 0.005 | search_minus_done; http://172.18.8.78:28021/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=45
0.088 | 0.002 | cgi_end;

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