# [ GGGenome | 2024-12-27 06:50:51 ] # database: Gossypium raimondii genome, v2.1 # query: TTCATTGACAACATT # count: 9 # query: AATGTTGTCAATGAA # count: 17 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins Chr01 + 16052103 16052117 CTAAGCACTTAGTGCCGAGGCGTGTTATCAGTTGGATTGGCTCATATGAGTGTTTGGTGTGTTTTCTAACGGTTAACCGTGCACCTATATCCATATATCGTTCATTGACAACATTCTAGTGAAAACGGATTATTATTTGAATTGTGGTGTCAATGATGGCATATTGGTTAGGCACCTAGGTTGATTGTTTGTCATGCTTTGAGTATTTTTTTAAT 16052003 16052217 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 Chr02 + 45765368 45765382 GTTCCTGGTTATGCCTCTCAATTTGACGAACGCTCTGACTACATGTAGAGATTTAATGAATCGAGTGTTCCAACCGTATTTGGATCAGTTTGTTGTAGTTTTCATTGACAACATTCTGATTTATTCCAAGACTGAGTCTGAGCATGATGAGTAGCTTTGTACTATCCTGCAAATACTCCGTGAGAAGCAGTTGTATGCTAAGTTTAGTAAGTGTG 45765268 45765482 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 Chr07 + 12662396 12662410 TAGTGAACATACCGGAACCATCCACAAACTCAGGTGCAGCAGAAGCTCCACCCACATTATCAACAGCGTTTCCATTCTCAACTGTTGTGGCATTTCCTGCTTCATTGACAACATTTCCATTTAAATAACTGTAACCAGCAGCCTTAGGAGCTTCAGCTGTTACATTTCCAACATTAGCAGCACTCTCATCAGTTGATACACCAGCTGGCATACTG 12662296 12662510 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 Chr07 + 40785767 40785781 ATTCTTGGTGATGCCTTTCGGATTGACAAATGCTCTAGTGGCGTTCATGGATCTCATGAACCGTATTTTTCAACCCTATTTAGATCAATTTGTGGTAGTTTTCATTGACAACATTTTGATCTATTCAAAATCTGAAGGAGCACGAACAACATCTCTAGATCATTTTACAAGTGTTACGAGAAAAGCAGTTATGTGGGAAGCTTAGCAAATGCGAA 40785667 40785881 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 Chr09 + 43706194 43706208 ATTTCTAGTGATGCCTTTCGGTTTGACAAACGCTCTTACGACATTCATGGATCTAATGAACTGTACGTTCTAGCCCTATCTGGATCAATTTGTGGAAGTTTTCATTGACAACATTTTGATTTATTCGAAATCTTAAATTGAGCATGAAGAACATCTCCTGATTGTTTTGCAAGTGTTACGAAAAAAATCATTTATATGGGAAGCTTAGTGTCATG 43706094 43706308 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 Chr10 + 59166676 59166690 TCCTTTTCCACATTGAAACAAAGAGTTACTGGTTAGTGTTTTCTTTTTCTCTTGGACTTACTTATAACGCACATACATATTTTATGAGAGGATGTAGTAATTCATTGACAACATTGGTGAAGGGCAAACACTTTTCACTATCTAATCCATGGCTGCCACCATAAGCACCCTATGGATGGGCTAAGGCTTGTGATTCCACCTGCAGAAGCTGCTAT 59166576 59166790 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 Chr11 + 13247116 13247130 ATTATTGCAACATTGGCTTAATATTTTTCAAAATTATTATTGATATGATTTCTAAAATACAATACTTTATCCTTTTAAATTATCATTAATATGTTCTAATTTCATTGACAACATTTTAAATTTTCATTATATGGAATTATTTTAATATATATATGTGTATAAAATGTATTGTAACTTGTAACTTCAAAAATTTTATTCTACGCTTTAAAATTTTT 13247016 13247230 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 Chr12 + 28581665 28581679 TCAAATGAATGAGCCCCCTGGTGCTCGTGCTCGTGTTGGCCTTACTGGTCTGACTGTTGCTGAACATTTCCGTGATGCAGAAGGGCAGGATGTGCTTCTCTTCATTGACAACATTTTCCGTTTTACTCAAGTAAGATGGTGTATTGTATAAGCTTTTGAAGCACTCAAAGAGTACATGTTGCGTGTTCCTGATGGTTTGGATTGTTTTTTCCCCT 28581565 28581779 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 Chr13 + 10913304 10913318 ATTCTTGGTGATGCCTTTTGGGTTGACTAACGCTCCTGCGGCATTTATGGATCTCATGAACCACACTTTCCAACTGTATTTGGATCAATTTGTGGTAGTTTTCATTGACAACATTTTGATCTACATGAAATCTGAGTCCGAGCATGAGCAACATCTTAGAATCATTCTGCAGTCATTGCGAGAGAAACAATTATATGAGAAGCTTAGAAAGTGTG 10913204 10913418 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 Chr02 - 12927902 12927916 CACATTTGCTGAATTTAGCATATAACTGTTTATCTCTCAAAGTCTGTAACACAATTCTCAAATGTTCAGTATGCTCCGTCTCATCACGAGAATAGATTAGAATGTTGTCAATGAACACAACAACGGATCTGTCTAAATACGATCTGAATATTCGATTTATTAAATCCGTAAATACCGTAGGAGCGTTAGTCAAACCAAAAGGCATAACTAAAAAT 12927802 12928016 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr02 - 16235623 16235637 TTTTTGTAAATAAAAAAAGAAAAGAAACATTGAATACCAAAAGTTTCACTTTAGTACATGTATTAGAACCTTGGAAATAGAAGCTTTCAACTTCTTGTGAAATGTTGTCAATGAAGTCCGGACCTATTGGTTTGGTCATTTTCTCTTTTGTGCTCACATTTGTTTCTGCTTTTGCATTGACTGAACTTGTAGAGGCTTGAAGCTTTCTTTTTGAT 16235523 16235737 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr04 - 22432477 22432491 CACACTTACTAAACTTAGCATACAACTTTTTCTCGCGGAATATCTGCAGAACTATCCGAAGATGCTCATCGTGCTCACTCTCAGTTTTAGAATAAATCAGAATGTTGTCAATGAAGACTACGACAAATTGCTCTAGATAAGGCTAATATACTTGATTCATCAGATCCATGAACACAATTGGAGCATTCATTAATCCGAAAGGCAAGGCTAGGAAC 22432377 22432591 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr04 - 26338573 26338587 TCCCGAAACCAAAATTCATATTTTCTAAATTTCGCAAATAGTTTGGTAGTACAATTCCAAAACGCTCGGCATGCTCAGACTCATCTCGTGAATAAATCAGAATGTTGTCAATGAATACAACAACGAATCTGTCTAAATACAGTTTGAAGATTATGTTCATCAAATCCATAAATACGGCAGGTGCATTAGTTAAACCAAACGACATCACAAGAAAT 26338473 26338687 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr05 - 21533809 21533823 CACACTTGCTCAACTTAGCATAAAGTTGTTTCTTATGGAGTATTTGAAGAACTACTCTAATATGTCTATCATAATCTTCCTCAGTCTTAGAGTATACCAGAATGTTGTCAATGAAGACCACAACGAATTGATTCAAAAATAACTAAAAAACTCGATTCATAAGATCCATGAATGTAGCTGGAGCATTCTTCAAAACAAAGGACATAACTAAGAAC 21533709 21533923 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr05 - 32403257 32403271 CATATTTTCTAAACTTAGCGAACATTTGTTTTTCGCGCAAAGTTTGCAAAACAGTTCTCAAATGCTCGACATGCTCTGTCTTATCTCGTGAATAAATCAGAATGTTGTCAATGAAGGCCACAACAAATCTGTCTAAATACGCCATGAAGATTTTGTTTAATAAATCCATAAACACTGCAGGTGCATTAGTCAAACCAAATGGCATCACAAGAAAT 32403157 32403371 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr07 - 43344376 43344390 CGCATTTGCTCAACTTAGCATAGAGCTGTTTCTCTTGGAGTATTTGAAAAACTACTCTTAGATGCTCATCATGATCACCTTCGGTCTTAAAGTATACCACAATGTTGTCAATGAAAACCATCACGAACTAATCCAAGTACAGTTGAAAAACCCGATCCATAAGATCCATGAATGCAATTGGAACATTTGTCAAACCAAAGGGCATGACTAGGAAC 43344276 43344490 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr07 - 52563110 52563124 ATCTGCCAGGACATCACCCGTGAAGTCACCAGTGGCGAATTTTAAGACACCAGCATCTTTAAATGATCACTCAAAACAAGCCTTGAAGCAGAATAATTGTAATGTTGTCAATGAAGGGAAAAGCCCAATTAAAGGTGCCACTGAAGCAAACAGTGACGACGACGATGATTTACAACCTTTGAGTGCCCGGCTTAAGGGGATCTCAAACCAAGGTA 52563010 52563224 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr08 - 12551559 12551573 CTCATTTTCTAAGCTTCTTGTATAACTACTTTTCTCATAACACTTGCAAAATGATCTGGAGATGTTGTTTGTGCTCCGTTTCAAATTTCGAATAGATCAAAATGTTGTCAATGAAAACTACCACAAATTGATCTAAATAGGGTTGAAAAATATAGCTCATGAGATCCATGAACATCACCGAAGCATTTTTCAATCCGAAAAGTATCACCAAGAAT 12551459 12551673 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr08 - 15889360 15889374 CCAGAATTCACATTTGCTGAATTTAGCATTTATCTCTCAAAGTCTGCAACACGATTCTCAAATGTTCAATATGCTCCATCTTATCACGAGAATAGATCAGAATGTTGTCAATGAATACAACTGTCTAAATATGGTCTAAGAAAACAGTTCATTAAATCCATAAATACCGCAGGAGCGTTAGTCAAACCAAAAGGCATAACTAAAAATTCATAATG 15889260 15889474 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr09 - 4225973 4225987 TGTATTAAATAGTACTTTTTGGTATGCTTCACTACAAAAGGAGCAAAAATGAATCGAATTCTTGGTCAAAATGATACTTCCATTATTTGGTACCAACTACAATGTTGTCAATGAATTGCTTGAGTTGGTGCCTTATCCACCTCTTCATATACAAATTTAGGATTGTTAATTTTATTATTCATTTCATGTTACCATGAATTAAAAGGGAAAGCTTG 4225873 4226087 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr10 - 31094203 31094217 CACATTTGCTAAATTTGGCAAACAATTGTTTATCATACAGAGTTTGCAACACAATTCTCAAACGCTCAGCATGCACAGGCTCGTCTCATGAATATATCAGAATGTTGTCAATGAAAACCACAACGAATCTGCCTAAGTACAATCTGAATATTCTATTCATCAAATCCTTAAATACTGCAGTTACATTAGTTAAACCAAACGACATCACAAGAAAT 31094103 31094317 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr10 - 31407599 31407613 TAGAGGTACATGCCAAAGTCATGTCGAGATTGAGTTGAGAATTGGATGCTAAATTGTTTGTTATTTGTGCTTATAGACTAAAATGTTAGAAGAATCAAAAAATGTTGTCAATGAAGAGGTATAGAGTAAAGCTCCCTCTATTGGGGAAGGAGATCATGATAGGATCGAAGTTAACAATGATGATCAAGTTGAGTGCTTGATGAGCAACTATGACT 31407499 31407713 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr11 - 3158575 3158589 CTATTTGTTGATGAATTTCAGGATTGAAGCATTTAAAGCTATATTTGGTCAGCATATGCGTGTGAACCATAAGGATACCATATCTATTTCTGAAGTAGAGAATGTTGTCAATGAAGGAGCTGATGGCCATTACTCAAGGGCAGAGATCGTTGCTATATTAGAGGTAATGTTGGTATATGGATTGTTGGATAGGAATAAAGTTTTCATATTCTTAA 3158475 3158689 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr12 - 6840769 6840783 AAAAATTTTAAAGCGTAGAATAAAATTTTAGAAGTTACATGTTACAATACATTTTACACACATATATATATTAAAATAATTCCATATAATGAAAATTTAAAATGTTGTCAATGAAATTAGAACATATTAATGATAATTTAAAAGGATAAAGTATTGTATTTTAGAAATCATATCAATAATAATTTTGAAAAATATTAAGCCAATGTCGCAATAAT 6840669 6840883 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr12 - 28596081 28596095 AGGGGAAAAACACAATCCAAACCATCAGGAACACGCAACATGTACTGTTAAGTGCTTCAAAAGCTTATACAATACACCATCTTACTTGAGTAAAACGGAAAATGTTGTCAATGAAGAGAAGCACATCCTGCCCTTCAGCATCACGGAAATGTTCAGCAACAGTCAGACCAGTAAGGCCAACACGAGCACGAGCACCAGGGGGCTCATTCATTTGA 28595981 28596195 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 Chr13 - 20990509 20990523 TCACATTTACTCAGTTTGGCTACAATTGTTTCTCCTAGAGAATCTACAAAACCGCTTCCAAATGTTCATCATGTTCCTCCTTAGACTTGGAATAGATCAAAATGTTGTCAATGAAGACGACAACAAACTAGTCAAGGTAGGGCTGAAAAGCTGCCGAAGCATTCGTGAAACCAAAAGGCATTCCTGAAAGTGGTCTTAGGAATGTCCGTCTCTTT 20990409 20990623 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0