GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-11-22 15:38:36, GGGenome : Crab-eating macaque pre-spliced RNA, refGene on macFas5, D3G 19.06 (Jun, 2019)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

NM_001285042|SYT1|chr11:78209033:78691996:+|prespliced
position: 131586-131600
GTAAGATAGGTTTGTTCCAGAAGTTTAAAA131586AATGTTGTCAATGAATTTGATAAAATTTAATATTCACATTAGAAG
NM_001283163|CYP2G2|chr19:41593066:41606891:-|prespliced
position: 1473-1487
TTCCCTTAGGAGAGCTGTTAACATTATACT1473AATGTTGTCAATGAAAAGCTAAGATAGGCCAGCATGGTGGCTCAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/macFas5_refGene_prespliced_d3g1906/TTCATTGACAACATT
lang : en | db : macFas5_refGene_prespliced_d3g1906 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.083 | 0.074 | search_plus_done; http://172.18.8.75:28803/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.087 | 0.004 | search_minus_done; http://172.18.8.75:28803/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.088 | 0.002 | cgi_end;

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