# [ GGGenome | 2024-04-19 16:51:36 ] # database: Human pre-spliced RNA, RefSeq curated on hg38.p12, D3G 20.03 (Mar, 2020) # query: TTCATTGACAACATT # count: 10 # query: AATGTTGTCAATGAA # count: 17 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins NR_147074.1|LINC01362|chr1:82903182:83166815:+|prespliced + 93611 93625 TTCTCTTCCTCCTCCTCCTCAGCCTCAACATGAAGATGATGAAAATGGAGACCTTCATCGTGATCCACTTCTAATTAATGAATAGTAAGTATATTTTCTCTTCATTGACAACATTTTTCCTCTTACTTTATTGTAAGAATACAATATACGATATATATTGCCATGCAAAATATGTGTTAATTGACTATATTATATTATTGATAGGACTTCTTGAG 93511 93725 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NR_046871.1|LINC00333|chr13:84140601:84606768:+|prespliced + 50811 50825 CCATGGGGAGCCAGGGAGAATTTCTGCACCTCCCACTGCTTCCTTTAAGTTGTCATCCTCCTCCACTGCTGCAGTCTGGAGGTTCTCCCTGGAGGCTGTATTCATTGACAACATTTCCTGAGGTAACTCACACTGAGGTGACAACCTTAATAGCAACACTCTGGAAATGCGCCCAGTAGCAGCTACTGCAGTGTTCTTCATCTAACTGGATTTTT 50711 50925 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_001304840.3|HECW2|chr2:196194071:196362177:-|prespliced + 149028 149042 ACTATTAACATTGGCTCCACAAAGAATAAAAGTACATTCGGAGGGAAAAAATTAAAAGAACTTAATTGCATGACAGTATAGTTATATGAGAAGCAACTTCTTCATTGACAACATTGTCATCACCCTTAATGAAATGTGGGGCATTACTTAGGTGTAAAAAAAGATCTGTAAAATTGGTTCTGGCCTAAAGAGATTCTTTTATATTATCAAGTCCA 148928 149142 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_020760.4|HECW2|chr2:196194071:196592983:-|prespliced + 379834 379848 ACTATTAACATTGGCTCCACAAAGAATAAAAGTACATTCGGAGGGAAAAAATTAAAAGAACTTAATTGCATGACAGTATAGTTATATGAGAAGCAACTTCTTCATTGACAACATTGTCATCACCCTTAATGAAATGTGGGGCATTACTTAGGTGTAAAAAAAGATCTGTAAAATTGGTTCTGGCCTAAAGAGATTCTTTTATATTATCAAGTCCA 379734 379948 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_001348768.2|HECW2|chr2:196194071:196593554:-|prespliced + 380405 380419 ACTATTAACATTGGCTCCACAAAGAATAAAAGTACATTCGGAGGGAAAAAATTAAAAGAACTTAATTGCATGACAGTATAGTTATATGAGAAGCAACTTCTTCATTGACAACATTGTCATCACCCTTAATGAAATGTGGGGCATTACTTAGGTGTAAAAAAAGATCTGTAAAATTGGTTCTGGCCTAAAGAGATTCTTTTATATTATCAAGTCCA 380305 380519 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_014296.3|CAPN7|chr3:15206245:15252916:+|prespliced + 42038 42052 TAAATAAATAAATAAAAATAAAAAAATAAAAACACATTATAAAGGGGGCAATCCAGATGGCCAGTAAACCATTGTAATAGCCAGAAATTGGAAACATATATTCATTGACAACATTTAAGATTATAATATAGTCATATAATAGTCCTGATATAACAATGGAAATAAATTACAGCTACACACAACATAATGGATAAGTCTTAAAAAGCCACATGTAC 41938 42152 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NR_027112.2|LINC02112|chr5:9641314:9903824:-|prespliced + 144420 144434 CTGGATTCCACCCAAATTCTGTTTGGTGTATCTGGGAAGGGGGCCAGAAACTTTTTAACTGTACAAGCACCCTGGGTATAATGCACTGATCTGTTGATCTTTCATTGACAACATTGCCATCGACTTTGGAGCTGGAAAGGCCCTCAAAGAGTGTGCATCCTGACCTTTACATTTTATGAATGAGATGCTGGATTTCCAGAGTGTTGAGTGCAAAG 144320 144534 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_152744.4|SDK1|chr7:3301251:4269000:+|prespliced + 222790 222804 TCTGTACATTCTCCTTTGAGTCTGGATCCTTGATCCTGGCCTGTGATTCCATCTCAGGAGTTAGAAGCCTGTGGTGCCTGGCCTGAGTCAGCTCATTAGCTTCATTGACAACATTGGTTCGTTCAACAAATATTGCCTGAGAAGAAGACATTTAAGCAAAGACCTGCAGGAAGGAAGGGAGTTAACTAAGTGGATATGTGGGGCAAGAACTTCCC 222690 222904 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_012301.4|MAGI2|chr7:78017054:79453667:-|prespliced + 731566 731580 TACAATTTCCTAGATTAAACAATACATTCAAATGAGGTAATGAATTATGTGTTTTAAGAGCAGAATGAGCTATATTTGTTATAGAATATTATGTTAAATCTTCATTGACAACATTAAAGAGTCATACCTTTTATGGGTGTTAGTTAATTACGTATACTTATTTCCTTGGAACAAGATATATTTTACAAATAAAAAAGTTTTTCTATAATATTTTG 731466 731680 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_001301128.2|MAGI2|chr7:78017054:79453667:-|prespliced + 731566 731580 TACAATTTCCTAGATTAAACAATACATTCAAATGAGGTAATGAATTATGTGTTTTAAGAGCAGAATGAGCTATATTTGTTATAGAATATTATGTTAAATCTTCATTGACAACATTAAAGAGTCATACCTTTTATGGGTGTTAGTTAATTACGTATACTTATTTCCTTGGAACAAGATATATTTTACAAATAAAAAAGTTTTTCTATAATATTTTG 731466 731680 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_001135805.2|SYT1|chr12:78863981:79452008:+|prespliced - 243533 243547 TAGATGAATACAAAAGTATAAAATATATACCAACAAGGTATTTCCAATAATACATTAATGTATTGATGACATAAGATAGGTTTGTTCCAGAAGTTTAAAAAATGTTGTCAATGAATTTGATAAAGTTTAATATTCACATTAAAAGTATTACCGTTAAAACCAAAATATAGCATACTTATTCTCTCCATTATTTTGGAATAAGAAAAAATTATTCT 243433 243647 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001291901.2|SYT1|chr12:78864773:79452008:+|prespliced - 242741 242755 TAGATGAATACAAAAGTATAAAATATATACCAACAAGGTATTTCCAATAATACATTAATGTATTGATGACATAAGATAGGTTTGTTCCAGAAGTTTAAAAAATGTTGTCAATGAATTTGATAAAGTTTAATATTCACATTAAAAGTATTACCGTTAAAACCAAAATATAGCATACTTATTCTCTCCATTATTTTGGAATAAGAAAAAATTATTCT 242641 242855 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_005639.3|SYT1|chr12:78864773:79452008:+|prespliced - 242741 242755 TAGATGAATACAAAAGTATAAAATATATACCAACAAGGTATTTCCAATAATACATTAATGTATTGATGACATAAGATAGGTTTGTTCCAGAAGTTTAAAAAATGTTGTCAATGAATTTGATAAAGTTTAATATTCACATTAAAAGTATTACCGTTAAAACCAAAATATAGCATACTTATTCTCTCCATTATTTTGGAATAAGAAAAAATTATTCT 242641 242855 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001135806.2|SYT1|chr12:79045691:79452008:+|prespliced - 61823 61837 TAGATGAATACAAAAGTATAAAATATATACCAACAAGGTATTTCCAATAATACATTAATGTATTGATGACATAAGATAGGTTTGTTCCAGAAGTTTAAAAAATGTTGTCAATGAATTTGATAAAGTTTAATATTCACATTAAAAGTATTACCGTTAAAACCAAAATATAGCATACTTATTCTCTCCATTATTTTGGAATAAGAAAAAATTATTCT 61723 61937 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NR_040249.1|CYP2G1P|chr19:40890825:40900508:+|prespliced - 1462 1476 GAAATGACTGCAATGCACTCCCTATATGCCAGGTTCTTTGGTAAGTAGTCCACATGACTTACTGTATTGACTCCCTTAGGAGAGCTGTTAACATTATACTAATGTTGTCAATGAAAAAGCTAAGATAGGCCAGGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGTTGAGGCGGGCAGATCACCTGAAGTCAGGAGTTTGATACCAG 1362 1576 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_016836.4|RBMS1|chr2:160272150:160493807:-|prespliced - 127190 127204 CATCACTTTAGGAATAAGAACTCAATTCTGCCCTTTCAGAGTGTTCTGAAGGGATGTGTGCATGTGCATAAAGTTCCAAAGTAAATTTGCATTATATGCTAATGTTGTCAATGAATAGAATATAAATGTGCTTCTTTGCTGCAATTACACTAACTCACTAAGTAAGAAAGCACTAATTTTAAAACAAGGAGCCAGAAGCACTGTATAGTGCAAAG 127090 127304 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_002897.5|RBMS1|chr2:160272150:160493807:-|prespliced - 127190 127204 CATCACTTTAGGAATAAGAACTCAATTCTGCCCTTTCAGAGTGTTCTGAAGGGATGTGTGCATGTGCATAAAGTTCCAAAGTAAATTTGCATTATATGCTAATGTTGTCAATGAATAGAATATAAATGTGCTTCTTTGCTGCAATTACACTAACTCACTAAGTAAGAAAGCACTAATTTTAAAACAAGGAGCCAGAAGCACTGTATAGTGCAAAG 127090 127304 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001080448.3|EPHA6|chr3:96814593:97761532:+|prespliced - 545885 545899 ACTCCACTATCTTTACAGAATTCTCTGTATAATGATATTTGGTATTTTATTTCAGATTTGATGAAAACATAATTTGAATATTAATTTTAAAATTTATTCAAATGTTGTCAATGAACATTGTCAGACATTTTGCAGCATTTCTTTATATTGTTTAAAATTTTGTGGTCAGGATAAATTTTATTCCTTTCTTTTTCTTTAATTTTGTGTCTGGTTTG 545785 545999 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NR_146870.1|KHDRBS2|chr6:61542696:62286227:-|prespliced - 287903 287917 GAAAATCTCATTTTGCTAGAGGGAATCAAATGTCTTCCAGACACCTTTGACTGAATTTTTCAGGAGTGTAAGAAATAGCAACTTATTATAGTATGAGTAAAATGTTGTCAATGAAGTATGATTACAAGATGGTTGATTGAAATAGTTGTTCAGTGAATTAATTCAATTTCTTCTCACTCTTTAAAATTGCCTTAATTAAACTGCATTAAAGATTT 287803 288017 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NR_146871.2|KHDRBS2|chr6:61630252:62286225:-|prespliced - 287901 287915 GAAAATCTCATTTTGCTAGAGGGAATCAAATGTCTTCCAGACACCTTTGACTGAATTTTTCAGGAGTGTAAGAAATAGCAACTTATTATAGTATGAGTAAAATGTTGTCAATGAAGTATGATTACAAGATGGTTGATTGAAATAGTTGTTCAGTGAATTAATTCAATTTCTTCTCACTCTTTAAAATTGCCTTAATTAAACTGCATTAAAGATTT 287801 288015 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NR_146874.2|KHDRBS2|chr6:61630252:62286225:-|prespliced - 287901 287915 GAAAATCTCATTTTGCTAGAGGGAATCAAATGTCTTCCAGACACCTTTGACTGAATTTTTCAGGAGTGTAAGAAATAGCAACTTATTATAGTATGAGTAAAATGTTGTCAATGAAGTATGATTACAAGATGGTTGATTGAAATAGTTGTTCAGTGAATTAATTCAATTTCTTCTCACTCTTTAAAATTGCCTTAATTAAACTGCATTAAAGATTT 287801 288015 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NR_146873.2|KHDRBS2|chr6:61630252:62286225:-|prespliced - 287901 287915 GAAAATCTCATTTTGCTAGAGGGAATCAAATGTCTTCCAGACACCTTTGACTGAATTTTTCAGGAGTGTAAGAAATAGCAACTTATTATAGTATGAGTAAAATGTTGTCAATGAAGTATGATTACAAGATGGTTGATTGAAATAGTTGTTCAGTGAATTAATTCAATTTCTTCTCACTCTTTAAAATTGCCTTAATTAAACTGCATTAAAGATTT 287801 288015 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001350622.1|KHDRBS2|chr6:61679959:62286227:-|prespliced - 287903 287917 GAAAATCTCATTTTGCTAGAGGGAATCAAATGTCTTCCAGACACCTTTGACTGAATTTTTCAGGAGTGTAAGAAATAGCAACTTATTATAGTATGAGTAAAATGTTGTCAATGAAGTATGATTACAAGATGGTTGATTGAAATAGTTGTTCAGTGAATTAATTCAATTTCTTCTCACTCTTTAAAATTGCCTTAATTAAACTGCATTAAAGATTT 287803 288017 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NR_146872.1|KHDRBS2|chr6:61679959:62286227:-|prespliced - 287903 287917 GAAAATCTCATTTTGCTAGAGGGAATCAAATGTCTTCCAGACACCTTTGACTGAATTTTTCAGGAGTGTAAGAAATAGCAACTTATTATAGTATGAGTAAAATGTTGTCAATGAAGTATGATTACAAGATGGTTGATTGAAATAGTTGTTCAGTGAATTAATTCAATTTCTTCTCACTCTTTAAAATTGCCTTAATTAAACTGCATTAAAGATTT 287803 288017 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_152688.4|KHDRBS2|chr6:61679960:62286225:-|prespliced - 287901 287915 GAAAATCTCATTTTGCTAGAGGGAATCAAATGTCTTCCAGACACCTTTGACTGAATTTTTCAGGAGTGTAAGAAATAGCAACTTATTATAGTATGAGTAAAATGTTGTCAATGAAGTATGATTACAAGATGGTTGATTGAAATAGTTGTTCAGTGAATTAATTCAATTTCTTCTCACTCTTTAAAATTGCCTTAATTAAACTGCATTAAAGATTT 287801 288015 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_133468.5|BMPER|chr7:33904914:34156427:+|prespliced - 214035 214049 TTCTGCCAGCAGATCACCATCATGAAATGCAGCGTCACCTCTTGCCTGGGTCTCTAGCCTGCCAGGCTACTCTACAGATTTTGGATTTACCAGCCCCCACAATGTTGTCAATGAATTCCTTAAAATCTCTCTCTCTCTCTCTCTCACTGTCTCTCTCTCTCTCTCTCACACACACACACACACACACACGCACTCGATACGATGACACATATACA 213935 214149 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001365308.1|BMPER|chr7:33905538:34156427:+|prespliced - 213411 213425 TTCTGCCAGCAGATCACCATCATGAAATGCAGCGTCACCTCTTGCCTGGGTCTCTAGCCTGCCAGGCTACTCTACAGATTTTGGATTTACCAGCCCCCACAATGTTGTCAATGAATTCCTTAAAATCTCTCTCTCTCTCTCTCTCACTGTCTCTCTCTCTCTCTCTCACACACACACACACACACACACGCACTCGATACGATGACACATATACA 213311 213525 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0