# [ GGGenome | 2024-03-29 08:54:35 ] # database: Human pre-spliced RNA, RefSeq curated protein coding on hg38, D3G 19.06 (Jun, 2019) # query: TTCATTGACAACATT # count: 7 # query: AATGTTGTCAATGAA # count: 10 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins NM_001304840.2|HECW2|chr2:196194369:196362222:-|prespliced + 149073 149087 ACTATTAACATTGGCTCCACAAAGAATAAAAGTACATTCGGAGGGAAAAAATTAAAAGAACTTAATTGCATGACAGTATAGTTATATGAGAAGCAACTTCTTCATTGACAACATTGTCATCACCCTTAATGAAATGTGGGGCATTACTTAGGTGTAAAAAAAGATCTGTAAAATTGGTTCTGGCCTAAAGAGATTCTTTTATATTATCAAGTCCA 148973 149187 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_020760.3|HECW2|chr2:196194369:196592684:-|prespliced + 379535 379549 ACTATTAACATTGGCTCCACAAAGAATAAAAGTACATTCGGAGGGAAAAAATTAAAAGAACTTAATTGCATGACAGTATAGTTATATGAGAAGCAACTTCTTCATTGACAACATTGTCATCACCCTTAATGAAATGTGGGGCATTACTTAGGTGTAAAAAAAGATCTGTAAAATTGGTTCTGGCCTAAAGAGATTCTTTTATATTATCAAGTCCA 379435 379649 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_001348768.1|HECW2|chr2:196194369:196593692:-|prespliced + 380543 380557 ACTATTAACATTGGCTCCACAAAGAATAAAAGTACATTCGGAGGGAAAAAATTAAAAGAACTTAATTGCATGACAGTATAGTTATATGAGAAGCAACTTCTTCATTGACAACATTGTCATCACCCTTAATGAAATGTGGGGCATTACTTAGGTGTAAAAAAAGATCTGTAAAATTGGTTCTGGCCTAAAGAGATTCTTTTATATTATCAAGTCCA 380443 380657 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_014296.2|CAPN7|chr3:15206225:15252916:+|prespliced + 42058 42072 TAAATAAATAAATAAAAATAAAAAAATAAAAACACATTATAAAGGGGGCAATCCAGATGGCCAGTAAACCATTGTAATAGCCAGAAATTGGAAACATATATTCATTGACAACATTTAAGATTATAATATAGTCATATAATAGTCCTGATATAACAATGGAAATAAATTACAGCTACACACAACATAATGGATAAGTCTTAAAAAGCCACATGTAC 41958 42172 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_152744.3|SDK1|chr7:3301447:4269000:+|prespliced + 222594 222608 TCTGTACATTCTCCTTTGAGTCTGGATCCTTGATCCTGGCCTGTGATTCCATCTCAGGAGTTAGAAGCCTGTGGTGCCTGGCCTGAGTCAGCTCATTAGCTTCATTGACAACATTGGTTCGTTCAACAAATATTGCCTGAGAAGAAGACATTTAAGCAAAGACCTGCAGGAAGGAAGGGAGTTAACTAAGTGGATATGTGGGGCAAGAACTTCCC 222494 222708 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_012301.3|MAGI2|chr7:78017056:79453574:-|prespliced + 731473 731487 TACAATTTCCTAGATTAAACAATACATTCAAATGAGGTAATGAATTATGTGTTTTAAGAGCAGAATGAGCTATATTTGTTATAGAATATTATGTTAAATCTTCATTGACAACATTAAAGAGTCATACCTTTTATGGGTGTTAGTTAATTACGTATACTTATTTCCTTGGAACAAGATATATTTTACAAATAAAAAAGTTTTTCTATAATATTTTG 731373 731587 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_001301128.1|MAGI2|chr7:78017056:79453574:-|prespliced + 731473 731487 TACAATTTCCTAGATTAAACAATACATTCAAATGAGGTAATGAATTATGTGTTTTAAGAGCAGAATGAGCTATATTTGTTATAGAATATTATGTTAAATCTTCATTGACAACATTAAAGAGTCATACCTTTTATGGGTGTTAGTTAATTACGTATACTTATTTCCTTGGAACAAGATATATTTTACAAATAAAAAAGTTTTTCTATAATATTTTG 731373 731587 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 NM_001135805.1|SYT1|chr12:78863992:79452008:+|prespliced - 243522 243536 TAGATGAATACAAAAGTATAAAATATATACCAACAAGGTATTTCCAATAATACATTAATGTATTGATGACATAAGATAGGTTTGTTCCAGAAGTTTAAAAAATGTTGTCAATGAATTTGATAAAGTTTAATATTCACATTAAAAGTATTACCGTTAAAACCAAAATATAGCATACTTATTCTCTCCATTATTTTGGAATAAGAAAAAATTATTCT 243422 243636 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001291901.1|SYT1|chr12:78864668:79452008:+|prespliced - 242846 242860 TAGATGAATACAAAAGTATAAAATATATACCAACAAGGTATTTCCAATAATACATTAATGTATTGATGACATAAGATAGGTTTGTTCCAGAAGTTTAAAAAATGTTGTCAATGAATTTGATAAAGTTTAATATTCACATTAAAAGTATTACCGTTAAAACCAAAATATAGCATACTTATTCTCTCCATTATTTTGGAATAAGAAAAAATTATTCT 242746 242960 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_005639.2|SYT1|chr12:78864668:79452008:+|prespliced - 242846 242860 TAGATGAATACAAAAGTATAAAATATATACCAACAAGGTATTTCCAATAATACATTAATGTATTGATGACATAAGATAGGTTTGTTCCAGAAGTTTAAAAAATGTTGTCAATGAATTTGATAAAGTTTAATATTCACATTAAAAGTATTACCGTTAAAACCAAAATATAGCATACTTATTCTCTCCATTATTTTGGAATAAGAAAAAATTATTCT 242746 242960 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001135806.1|SYT1|chr12:79045652:79452008:+|prespliced - 61862 61876 TAGATGAATACAAAAGTATAAAATATATACCAACAAGGTATTTCCAATAATACATTAATGTATTGATGACATAAGATAGGTTTGTTCCAGAAGTTTAAAAAATGTTGTCAATGAATTTGATAAAGTTTAATATTCACATTAAAAGTATTACCGTTAAAACCAAAATATAGCATACTTATTCTCTCCATTATTTTGGAATAAGAAAAAATTATTCT 61762 61976 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_016836.3|RBMS1|chr2:160272150:160493807:-|prespliced - 127190 127204 CATCACTTTAGGAATAAGAACTCAATTCTGCCCTTTCAGAGTGTTCTGAAGGGATGTGTGCATGTGCATAAAGTTCCAAAGTAAATTTGCATTATATGCTAATGTTGTCAATGAATAGAATATAAATGTGCTTCTTTGCTGCAATTACACTAACTCACTAAGTAAGAAAGCACTAATTTTAAAACAAGGAGCCAGAAGCACTGTATAGTGCAAAG 127090 127304 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_002897.4|RBMS1|chr2:160272150:160493807:-|prespliced - 127190 127204 CATCACTTTAGGAATAAGAACTCAATTCTGCCCTTTCAGAGTGTTCTGAAGGGATGTGTGCATGTGCATAAAGTTCCAAAGTAAATTTGCATTATATGCTAATGTTGTCAATGAATAGAATATAAATGTGCTTCTTTGCTGCAATTACACTAACTCACTAAGTAAGAAAGCACTAATTTTAAAACAAGGAGCCAGAAGCACTGTATAGTGCAAAG 127090 127304 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001080448.2|EPHA6|chr3:96814580:97748942:+|prespliced - 545898 545912 ACTCCACTATCTTTACAGAATTCTCTGTATAATGATATTTGGTATTTTATTTCAGATTTGATGAAAACATAATTTGAATATTAATTTTAAAATTTATTCAAATGTTGTCAATGAACATTGTCAGACATTTTGCAGCATTTCTTTATATTGTTTAAAATTTTGTGGTCAGGATAAATTTTATTCCTTTCTTTTTCTTTAATTTTGTGTCTGGTTTG 545798 546012 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_001350622.1|KHDRBS2|chr6:61679959:62286227:-|prespliced - 287903 287917 GAAAATCTCATTTTGCTAGAGGGAATCAAATGTCTTCCAGACACCTTTGACTGAATTTTTCAGGAGTGTAAGAAATAGCAACTTATTATAGTATGAGTAAAATGTTGTCAATGAAGTATGATTACAAGATGGTTGATTGAAATAGTTGTTCAGTGAATTAATTCAATTTCTTCTCACTCTTTAAAATTGCCTTAATTAAACTGCATTAAAGATTT 287803 288017 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_152688.3|KHDRBS2|chr6:61679959:62286227:-|prespliced - 287903 287917 GAAAATCTCATTTTGCTAGAGGGAATCAAATGTCTTCCAGACACCTTTGACTGAATTTTTCAGGAGTGTAAGAAATAGCAACTTATTATAGTATGAGTAAAATGTTGTCAATGAAGTATGATTACAAGATGGTTGATTGAAATAGTTGTTCAGTGAATTAATTCAATTTCTTCTCACTCTTTAAAATTGCCTTAATTAAACTGCATTAAAGATTT 287803 288017 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 NM_133468.4|BMPER|chr7:33904910:34155872:+|prespliced - 214039 214053 TTCTGCCAGCAGATCACCATCATGAAATGCAGCGTCACCTCTTGCCTGGGTCTCTAGCCTGCCAGGCTACTCTACAGATTTTGGATTTACCAGCCCCCACAATGTTGTCAATGAATTCCTTAAAATCTCTCTCTCTCTCTCTCTCACTGTCTCTCTCTCTCTCTCTCACACACACACACACACACACACGCACTCGATACGATGACACATATACA 213939 214153 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0