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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2024-11-22 00:15:12, GGGenome : Citrullus lanatus subsp. vulgaris (97103) genome, v1

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Chr3
position: 15482535-15482549
GCAGCATTCCACGACACATTCGTAATAGTC15482535TTCATTGACAACATTTTGGTGTATTCTCGAACCGAGGCTGAGCAC
Chr4
position: 15134174-15134188
AAGCACGAGGACAAAATAAGAAGGAACAAC15134174TTCATTGACAACATTCTTCTGTTTGGTAAGGTTTAACAAACAAGT
Chr6
position: 1630372-1630386
TGAATTACTTCAAACATGACTTAACTTAGT1630372TTCATTGACAACATTAAAATTAACGTACTGCAACAGGGGTGCCAA
Chr6
position: 7268551-7268565
TGAAGAAGATTGTGAGCTGTTGTCTTGAGT7268551TTCATTGACAACATTGAAGACTGTACCACGGAAAGATTGAAAAGA
Chr5
position: 17546968-17546982
AAAAAGTGTTCTTAAAAGGTAACTAAGTCA17546968AATGTTGTCAATGAAAACCATGTAGAAGGTTACTGAAAAGTGTCC
Chr5
position: 29851701-29851715
CACAAGCTTGCTTACCTGGGTAAAACGGAA29851701AATGTTGTCAATGAAGAGAAGCACATCTTGCCCTTCAGCATCACG
Chr0
position: 443548-443562
TCTTTTCAATCTTTCCGTGGTACAGTCTTC443548AATGTTGTCAATGAAACTCAAGACAACAGCTCACAATCTTCTTCA
Chr0
position: 5665596-5665610
CCAAAAATGTTCTAAAAGGTAGCTAAGTCA5665596AATGTTGTCAATGAAAACCATGTAAAAGGCTCATAAAAAGTATCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/W97103_v1/TTCATTGACAACATT
lang : ja | db : W97103_v1 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.083 | 0.074 | search_plus_done; http://172.18.8.72:28215/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.090 | 0.006 | search_minus_done; http://172.18.8.72:28215/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=46
0.092 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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