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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-04 07:40:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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UCRCS01_03dc06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_03dc06, mRNA sequence.
CB292008.1:402-421
ATGTCTCATACGAATGGGGCCAACAATAGT402ACGGGATCAAACACAAATCCACATACCCAAAGTTGTCTCCTCCGAAAAAA
C06007D12SK FlavCurFr1 Citrus clementina x Citrus tangerina cDNA clone C06007D12, mRNA sequence.
CX297994.1:481-500
ATGTCTCATACGAATAAAACCAACAATAGT481ACGGGATCAAACACAAATCCACATACCCAAAGTTGTCTCCTCCGAAAAAA
C06024C12SK RindPdig24 Citrus clementina cDNA clone C06024C12, mRNA sequence.
CX299613.1:201-220
ATGTCTCATACGAATAAAACCAACAATAGT201ACGGGATCAAACACAAATCCACATACCCAAAGTTGTCTCCTCCGAAAAAA
UCRPT02_2E10_t Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifoliata cDNA clone UCRPT02-2E10-I19-1-6.t, mRNA sequence.
CX637888.1:414-433
ATGTCTCATACGAATAAAACCAACAATAGT414ACGGGATCAAACACAAATCCACATACCCAAAGTTGTCTCCTCCGAAAAAA
UCRCP01_011_G09_T7 Swingle citrumelo nematode-challenged root cDNA library - UCRCP01 Citrus x paradisi x Citrus trifoliata cDNA clone UCRCP01_011_T7_G09, mRNA sequence.
CX664693.1:363-382
ATGTCTCATACGAATAAAACCAACAATAGT363ACGGGATCAAACACAAATCCACATACCCAAAGTTGTCTCCTCCGAAAAAA
UCRCS08_64F02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-64F02-K4-1-5.g, mRNA sequence.
CX675754.1:479-498
ATGTCTCATACGAATAAAACCAACAATAGT479ACGGGATCAAACACAAATCCACATACCCAAAGTTGTCTCCTCCGAAAAAA
Citrus unshiu mRNA, clone: PCC0828, 5'-end sequence, expressed in callus.
DC896225.1:390-409
ATGTCTCATACGAATAAAACCAACAATAGT390ACGGGATCAAACACAAATCCACATACCCAAAGTTGTCTCCTCCGAAAAAA
USDA-FP_00502 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00502 5', mRNA sequence.
BQ623411.1:414-433
TTTTTTCGGAGGAGACAACTTTGGGTATGT414GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
UCRCS01_03dc06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_03dc06, mRNA sequence.
CB292009.1:504-523
TTTTTTCGGAGGAGACAACTTTGGGTATGT504GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
USDA-FP_122000-761 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-55_F01 5', mRNA sequence.
CF507260.1:469-488
TTTTTTCGGAGGAGACAACTTTGGGTATGT469GGATTTGTGTTTGATCCCGTACTATTGTTGG
CGF1004386_E11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IVF_E11 5', mRNA sequence.
CK936124.1:376-395
TTTTTTCGGAGGAGACAACTTTGGGTATGT376GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
CGF1004441_E07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIF_E07 5', mRNA sequence.
CK938536.1:523-542
TTTTTTCGGAGGAGACAACTTTGGGTATGT523GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
UCRCS07_2G10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-2G10-N20-1-6.g, mRNA sequence.
CX045585.1:393-412
TTTTTTCGGAGGAGACAACTTTGGGTATGT393GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
UCRPT02_2E10_g2 Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifoliata cDNA clone UCRPT02-2E10-I19-1-5.g2, mRNA sequence.
CX637887.1:546-565
TTTTTTCGGAGGAGACAACTTTGGGTATGT546GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
UCRCP01_011_G09_T3 Swingle citrumelo nematode-challenged root cDNA library - UCRCP01 Citrus x paradisi x Citrus trifoliata cDNA clone UCRCP01_011_T3_G09, mRNA sequence.
CX664692.1:497-516
TTTTTTCGGAGGAGACAACTTTGGGTATGT497GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
UCRCS08_64F02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-64F02-K4-1-6.b, mRNA sequence.
CX675753.1:200-219
TTTTTTCGGAGGAGACAACTTTGGGTATGT200GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
KN0AAL1DE04FM2 KCl-Salt1 Citrus reshni cDNA 5', mRNA sequence.
DY306417.1:465-484
TTTTTTCGGAGGAGACAACTTTGGGTATGT465GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
C3470 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC3470, mRNA sequence.
EL492565.1:290-309
TTTTTTCGGAGGAGACAACTTTGGGTATGT290GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
Volcani_8_06_B2 Volcani08 Citrus reticulata x Citrus temple cDNA, mRNA sequence.
EX449306.1:551-570
TTTTTTCGGAGGAGACAACTTTGGGTATGT551GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
CS00-C3-700-016-G12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY693643.1:485-504
TTTTTTCGGAGGAGACAACTTTGGGTATGT485GGATTTGTGTTTGATCCCGTACTATTGGTGGTTTTATTCGTATGAGACAT
CS00-C3-703-088-E08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
EY726268.1:516-535
TTTTTTCGGAGGAGACAACTTTGGGTATGT516GGATTTGTGTTTGATCCCGTACTATTGGTGGTTTTATTCGTATGAGACAT
CR05-C3-701-029-B06-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence.
EY795342.1:481-500
TTTTTTCGGAGGAGACAACTTTGGGTATGT481GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
TS27-C2-300-036-B04-CT.F Sunki mandarin bark, greenhouse plant Citrus sunki cDNA, mRNA sequence.
EY889240.1:511-530
TTTTTCGGAGGAGACAACTTTTGGGTATGT511GGATTTGTGTTTGATCCCGTACTATTGTTGGGTTTATTCGTATGAAACAT
TS27-C2-300-047-G08-CT.F Sunki mandarin bark, greenhouse plant Citrus sunki cDNA, mRNA sequence.
EY891226.1:494-513
TTTTTTCGGAGGAGACAACTTTTGGTATGT494GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGAATGAGACTT
C31101G06EF AbioticR1 Citrus reshni cDNA clone C31101G06, mRNA sequence.
FC869467.1:521-540
TTTTTTCGGAGGAGACAACTTTGGGTATGT521GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
KN0AAL1DE04FM2 KCl_Salt1 Citrus reshni cDNA clone KN0AAL1DE04, mRNA sequence.
FC918821.1:463-482
TTTTTTCGGAGGAGACAACTTTGGGTATGT463GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
Citrus sinensis genome assembly, chromosome: 1.
OY754318.1:2463894-2463913
TTTTTTCGGAGGAGACAACTTTGGGTATGT2463894GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT
Citrus sinensis genome assembly, chromosome: 1.
OY754318.1:52135289-52135308
TTTTTTCGGAGGAGACAACTTTGGGTATGT52135289GGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACGGGATCAAACACAAATCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGGGATCAAACACAAATCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.307 | 0.298 | search_plus_done; http://172.18.8.135:50400/match?q=ACGGGATCAAACACAAATCC&k=0&no_gap=0&offset=0&limit=50
1.352 | 1.045 | search_minus_done; http://172.18.8.135:50400/match?q=GGATTTGTGTTTGATCCCGT&k=0&no_gap=0&offset=0&limit=43
1.366 | 0.014 | cgi_end;

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