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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:49:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Citrus reticulata microsatellite DNA, clone CiO1HO5.
AJ567401.1:111-133
CTTTCCTTTCTTTTCTTTTACCCTCCTTAA111AAAACAACCAAAAGGACAAGATTTAAAGATAAAACAGAGAGAGAGAGAGAGAG
CR05-C1-100-051-H07-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY762233.1:70-92
CTCTCTCTCTCTCTCTCTGTTTTATCTTTA70AATCTTGTCCTTTTGGTTGTTTTTTAAGGAGGGTAAAAGAAAAGAAAGGAAAG
CR05-C1-102-042-D07-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus reticulata cDNA, mRNA sequence.
EY769458.1:29-51
CCCACGCGTCCGCTCTGTTTTATCTTTA29AATCTTGTCCTTTTGGTTGTTTTTTAAGGAGGGTAAAAGAAAAGAAAGGAAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAACAACCAAAAGGACAAGATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAACAACCAAAAGGACAAGATT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.169 | 0.161 | search_plus_done; http://172.18.8.135:50400/match?q=AAAACAACCAAAAGGACAAGATT&k=0&no_gap=0&offset=0&limit=50
0.401 | 0.232 | search_minus_done; http://172.18.8.135:50400/match?q=AATCTTGTCCTTTTGGTTGTTTT&k=0&no_gap=0&offset=0&limit=49
0.403 | 0.001 | cgi_end;

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