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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 18:11:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Pinctada fucata DNA, chromosome 12, nearly complete sequence, Alternate Pseudohaplotype.
AP027127.1:39559600-39559619
TTTGATGACGTTTTATAACATTTATTGGGA39559600AAAATAATTCCCTCTCTGCCCTGTAAATGAAATTTTGTTACTCTAGTCCC
Philonthus spinipes genome assembly, chromosome: 12.
OY720311.1:20262815-20262834
AAACATTCCGCGCCCCGTATCCACCCTTAA20262815AAAATAATTCCCTCTCTGCCTCGTCTTCGGCATAAATGTCGATTTTTGTT
Philonthus spinipes genome assembly, chromosome: 12.
OY720311.1:20263317-20263336
AAACATTCCGCGCCCCGTATCCACCCTTAA20263317AAAATAATTCCCTCTCTGCCCCGTCTTCGGCATAAATGTCTATTTTTGTT
Apodemus sylvaticus genome assembly, chromosome: 5.
OX359301.1:106777037-106777056
CACTATTTAACATGAAGTATGTTCCACATG106777037GGCAGAGAGGGAATTATTTTATTATTTCTGCATGAGGTGCATTTTCATCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAATAATTCCCTCTCTGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAATAATTCCCTCTCTGCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.319 | 0.310 | search_plus_done; http://172.18.8.135:50400/match?q=AAAATAATTCCCTCTCTGCC&k=0&no_gap=0&offset=0&limit=50
0.403 | 0.085 | search_minus_done; http://172.18.8.135:50400/match?q=GGCAGAGAGGGAATTATTTT&k=0&no_gap=0&offset=0&limit=47
0.404 | 0.001 | cgi_end;

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