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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-15 17:26:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Cucumis melo genomic scaffold, anchoredscaffold00011.
LN681841.1:2383777-2383800
TTCGAAAAAAAAACTGAAAAAAAAGGAAAT2383777AAAATATGAAACCCATGGACATGACGTAGCCCTGTGTTTGTCAGGTTGACCATT
Cucumis melo isolate PI 511890 chromosome 4.
CP136104.1:34069645-34069668
AATGGTCAACCTGACAAACACAGGGCTACG34069645TCATGTCCATGGGTTTCATATTTTATTTCCTTTTTTTTCAGTTTTTTTTTTCGA
Cucumis melo genomic chromosome, chr_4.
LN713258.1:30739431-30739454
AATGGTCAACCTGACAAACACAGGGCTACG30739431TCATGTCCATGGGTTTCATATTTTATTTCCTTTTTTTTCAGTTTTTTTTTCGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAATATGAAACCCATGGACATGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAATATGAAACCCATGGACATGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.196 | 0.187 | search_plus_done; http://172.18.8.135:50400/match?q=AAAATATGAAACCCATGGACATGA&k=0&no_gap=0&offset=0&limit=50
0.310 | 0.114 | search_minus_done; http://172.18.8.135:50400/match?q=TCATGTCCATGGGTTTCATATTTT&k=0&no_gap=0&offset=0&limit=49
0.311 | 0.001 | cgi_end;

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