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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:04:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:60354568-60354587
AGTTCTTTTAACAAAAAAAATTCCAAACAC60354568AAAGACTCGAGACCAATACCATTATTTAAGATGAATTACACACACATATT
Schistosoma turkestanicum genome assembly, chromosome: 3.
OX103973.1:35949329-35949348
GTACCTGCATCTCAAAGTTATTATTCACTA35949329AAAGACTCGAGACCAATACCTTTCGTTATGACCTCCATCGCAATGGGGTG
Lotus japonicus genomic DNA, chromosome 4, clone: LjB11J20, BM0992.
AP007729.2:60877-60896
AATATGTGTGTGTAATTCATCTTAAATAAT60877GGTATTGGTCTCGAGTCTTTGTGTTTGGAATTTTTTTTGTTAAAAGAACT
Lotus japonicus genomic DNA, chromosome 4, clone: LjB26F10, BM1397.
AP008045.2:14437-14456
AATATGTGTGTGTAATTCATCTTAAATAAT14437GGTATTGGTCTCGAGTCTTTGTGTTTGGAATTTTTTTTGTTAAAAGAACT
Lotus japonicus genomic DNA, chromosome 4, clone: LjT46M09, TM1411.
AP008056.2:25091-25110
AATATGTGTGTGTAATTCATCTTAAATAAT25091GGTATTGGTCTCGAGTCTTTGTGTTTGGAATTTTTTTTGTTAAAAGAACT
Fragum fragum genome assembly, chromosome: 16.
OX336380.1:27074634-27074653
TCACGGTAAATATGTTCCATGCATGGCGCA27074634GGTATTGGTCTCGAGTCTTTCAATAGCCAACACCGTCATTCGGCGCGAGT
Melieria crassipennis genome assembly, chromosome: 2.
OY764962.1:121384739-121384758
AATTGGCACTGCACAGCAGTGTACCGTATC121384739GGTATTGGTCTCGAGTCTTTGTGTGCACACGCGCGATTAAATGTCACTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAGACTCGAGACCAATACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGACTCGAGACCAATACC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.179 | 0.170 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGACTCGAGACCAATACC&k=0&no_gap=0&offset=0&limit=50
0.245 | 0.067 | search_minus_done; http://172.18.8.135:50400/match?q=GGTATTGGTCTCGAGTCTTT&k=0&no_gap=0&offset=0&limit=48
0.249 | 0.004 | cgi_end;

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