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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:34:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Capricornis sumatraensis isolate serow.1 chromosome 6.
CP135632.1:99515147-99515166
ACCTTCCTGGTTTGTTTGACTTGAAAGACA99515147AAAGGGCAAAGTTAGGAGACTATTAATATTTGGAGTGCAATGTCTGCCTG
Lotus japonicus genomic DNA, chromosome 3, clone: LjB09K03, BM1720.
AP009632.1:2278-2297
AATTTCGTAGTTGAATGACGATTTTCGCAG2278AAAGGGCAAAGTTAGGAGACTAAAAGTGCAATTAAGCCAAATATATATAT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:59292614-59292633
AATTTCGTAGTTGAATGACGATTTTCGCAG59292614AAAGGGCAAAGTTAGGAGACTAAAAGTGCAATTAAGCCAAATATATATAT
Gymnocheta viridis genome assembly, chromosome: 4.
OY101443.1:90629564-90629583
ACGTTGTGGAAACACTTCGGAGATCATAAA90629564AAAGGGCAAAGTTAGGAGACCCATAGTTGAGAAAACGATATGCATGACAA
Ovis canadensis canadensis isolate 43U chromosome 2 sequence.
CP011887.1:22334172-22334191
CAGGCAGACATTGCACTCCAAATATTAATA22334172GTCTCCTAACTTTGCCCTTTTGTCTTTCAAGTCAAACAAACCAGGAAGGT
Valencia hispanica genome assembly, chromosome: 20.
OY747719.1:34052499-34052518
AGGTAAAGGGACAATTTTTTTACTATTTCT34052499GTCTCCTAACTTTGCCCTTTCTCTTCCTCTTTGCCCAGTCAGTTTTTGGC
Lotus japonicus genomic DNA, chromosome 4, clone: LjT15P01, TM1974.
AP010352.1:36397-36416
ATGTAAAATTAAGGCTTAATTGCACTTTTT36397GTCTCCTAACTTTGCCCTTTTTGTGAAAACAGTTCCCCAACTAAGAAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAGGGCAAAGTTAGGAGAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGGGCAAAGTTAGGAGAC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.175 | 0.166 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGGGCAAAGTTAGGAGAC&k=0&no_gap=0&offset=0&limit=50
0.238 | 0.063 | search_minus_done; http://172.18.8.135:50400/match?q=GTCTCCTAACTTTGCCCTTT&k=0&no_gap=0&offset=0&limit=46
0.240 | 0.002 | cgi_end;

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