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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:23:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gossypium bickii isolate GPG1lz chromosome 2.
CP106718.1:53460942-53460961
ATATGCAAATTCAAGCTTAAACAACCTAGA53460942AAATATCCATACAACCAATGTGCCAAACTGGCACCTCAACATCTATAATC
Virgibacillus phasianinus strain LM2416 chromosome, complete genome.
CP022315.1:2998821-2998840
TCCTACCGTAAACCTGGCAGTAGGCTATGA2998821AAATATCCATACAACCAATGAACGAATTGCTGTAGAGGATTTGGTTAAAA
Asterias rubens genome assembly, chromosome: 10.
LR699101.1:18971002-18971021
TATAGCCAAAGATAAATCACATTGTATAAA18971002AAATATCCATACAACCAATGCGTAGACTTGAGTAACAGCAAAACCCCGAA
Fragum fragum genome assembly, chromosome: 5.
OX336369.1:57888517-57888536
ATATTTTGGTGACTAAAGAAAGAGTATCAA57888517AAATATCCATACAACCAATGACTATTCTTAAAATAAAACATTGATATCAG
Clepsis dumicolana genome assembly, chromosome: 14.
OY829519.1:10365176-10365195
TATGGCAACTAGAGGCCCGTTATGTCCATT10365176AAATATCCATACAACCAATGATATTATAAGTAAAAAGATATGTCATATGC
Ailanthus altissima genome assembly, chromosome: 12.
OX327694.1:26009684-26009703
TCTTATCGAGTTGCCTAAAGGTGTAATATT26009684CATTGGTTGTATGGATATTTAAGACCAAAATGGATTCAAAAGGAATATCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAATATCCATACAACCAATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAATATCCATACAACCAATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.169 | 0.160 | search_plus_done; http://172.18.8.135:50400/match?q=AAATATCCATACAACCAATG&k=0&no_gap=0&offset=0&limit=50
0.256 | 0.087 | search_minus_done; http://172.18.8.135:50400/match?q=CATTGGTTGTATGGATATTT&k=0&no_gap=0&offset=0&limit=45
0.257 | 0.001 | cgi_end;

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