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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-09 22:08:18, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gossypium bickii isolate GPG1lz chromosome 2.
CP106718.1:53460942-53460961
ATATGCAAATTCAAGCTTAAACAACCTAGA53460942AAATATCCATACAACCAATGTGCCAAACTGGCACCTCAACATCTATAATC
Lathyrus linifolius genome assembly, chromosome: 5.
OZ206519.1:371452657-371452676
TATTTTCTAAACAACTCGACTACATTTTCC371452657AAATATCCATACAACCAATGTTTTAAAAACCGGACCGGTGATCGAACCGG
Virgibacillus phasianinus strain LM2416 chromosome, complete genome.
CP022315.1:2998821-2998840
TCCTACCGTAAACCTGGCAGTAGGCTATGA2998821AAATATCCATACAACCAATGAACGAATTGCTGTAGAGGATTTGGTTAAAA
Asterias rubens genome assembly, chromosome: 10.
LR699101.1:18971002-18971021
TATAGCCAAAGATAAATCACATTGTATAAA18971002AAATATCCATACAACCAATGCGTAGACTTGAGTAACAGCAAAACCCCGAA
Fragum fragum genome assembly, chromosome: 5.
OX336369.1:57888517-57888536
ATATTTTGGTGACTAAAGAAAGAGTATCAA57888517AAATATCCATACAACCAATGACTATTCTTAAAATAAAACATTGATATCAG
Clepsis dumicolana genome assembly, chromosome: 14.
OY829519.1:10365176-10365195
TATGGCAACTAGAGGCCCGTTATGTCCATT10365176AAATATCCATACAACCAATGATATTATAAGTAAAAAGATATGTCATATGC
Triturus cristatus genome assembly, chromosome: 7.
OZ123748.1:916150164-916150183
ACTCCCTTACAATGCTTCAAGTCAACTAAC916150164AAATATCCATACAACCAATGGGCTTAATATAGTTGATGATTTTACTAAAA
Ailanthus altissimus chromosome 15.
CP098002.1:26101165-26101184
TTTTGTCGAGTTGCCTAAATGTGTAAAATT26101165CATTGGTTGTATGGATATTTAAAACCACAATGGATTCAAAAGGAATATCG
Ailanthus altissima genome assembly, chromosome: 12.
OX327694.1:26009684-26009703
TCTTATCGAGTTGCCTAAAGGTGTAATATT26009684CATTGGTTGTATGGATATTTAAGACCAAAATGGATTCAAAAGGAATATCG
Torilis japonica genome assembly, chromosome: 2.
OZ239984.1:67317702-67317721
TATACATTAATTATTTGAGCTCTTGTATTT67317702CATTGGTTGTATGGATATTTAGACAACTAAATCAAATATTTAAATATTAT
Torilis japonica genome assembly, chromosome: 2.
OZ240053.1:64013394-64013413
TATACATTAATTATTTGAGCTCTTGTATTT64013394CATTGGTTGTATGGATATTTAGACAACTAAATCAAATATTTAAATATTAT
Ulmus minor genome assembly, chromosome: 1.
OZ240931.1:149836339-149836358
ACATCCAATTGATGTCTTTCTTTATTTATA149836339CATTGGTTGTATGGATATTTGATAAACCCCTTATCATTTACAAATGGCTT
Mysia undata genome assembly, chromosome: 1.
OZ067059.1:115785946-115785965
CAAAGCTTTCCAACACGGAGTCTACATTTT115785946CATTGGTTGTATGGATATTTATCCTGATCTTTCTAATATTGGTCTGCTGC
Carinascincus ocellatus genome assembly, chromosome: 7.
OZ258369.1:9354383-9354402
GAACCTGTTGTTAATTTATTTGAATCCCAC9354383CATTGGTTGTATGGATATTTTTACTTTGGTGTGTACATATTGGAGTGTAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAATATCCATACAACCAATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAATATCCATACAACCAATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.330 | 0.320 | search_plus_done; http://172.18.8.135:50900/match?q=AAATATCCATACAACCAATG&k=0&no_gap=0&offset=0&limit=50
0.578 | 0.248 | search_minus_done; http://172.18.8.135:50900/match?q=CATTGGTTGTATGGATATTT&k=0&no_gap=0&offset=0&limit=43
0.583 | 0.005 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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