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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-05 21:33:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Daucus carota subsp. sativus cultivar DH1 chromosome 7.
CP093349.1:38994787-38994806
TATATAGAACTGGTTTTTTAGAGTACATAG38994787AACTGCTCCTTGGTCCAAAATTTGGGATGAAATACTTGCCATTGAGGCGG
Daucus carota isolate Kuroda chromosome 7.
CP125307.1:39057765-39057784
TATATAGAACTGGTTTTTTAGAGTACATAG39057765AACTGCTCCTTGGTCCAAAATTTGGGATGAAATACTTGCCATTGAGGCGG
Hippopus hippopus genome assembly, chromosome: 17.
OX328112.1:14189005-14189024
AGAGAAAAGGAGCAACTAGCTGTAACAGAC14189005AACTGCTCCTTGGTCCAAAATGTCTTCAAAAGCACATTACTGTTGGATGG
Micromys minutus genome assembly, chromosome: 21.
OZ004801.1:13084566-13084585
GCCTGCCCTGAAATAGTAATATGAGGATGG13084566TTTTGGACCAAGGAGCAGTTTTCATCTTGTTGAGGATACTAATCTTCACT
Erodium maritimum genome assembly, chromosome: 8.
OY997595.1:20786153-20786172
TTTTGGGAGGAACACCTGTTTTCCAGACTG20786153TTTTGGACCAAGGAGCAGTTAGAGAGGGAGCAGAGGAGGTAGTGTCCAAG
Ceriagrion tenellum genome assembly, chromosome: X.
OY720638.1:104698773-104698792
TGCCACTTGCTCCGGGCAGCAGCTTATATT104698773TTTTGGACCAAGGAGCAGTTTTCCAGATTGATGAATACTTTTCTTCTCTC
Tridacna derasa genome assembly, chromosome: 17.
OY723430.1:22801129-22801148
CCATCCAACAGTAATGTGCTTTTGAAGACA22801129TTTTGGACCAAGGAGCAGTTGTCTGTTACAGCTAGTTGCTCCTTTTCTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACTGCTCCTTGGTCCAAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACTGCTCCTTGGTCCAAAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.168 | 0.159 | search_plus_done; http://172.18.8.135:50400/match?q=AACTGCTCCTTGGTCCAAAA&k=0&no_gap=0&offset=0&limit=50
0.264 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=TTTTGGACCAAGGAGCAGTT&k=0&no_gap=0&offset=0&limit=47
0.267 | 0.003 | cgi_end;

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