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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:24:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Conger conger genome assembly, chromosome: 15.
OY741328.1:17596820-17596840
CCTAATCTGGTCTGTTCAACACCTCCGTAC17596820AAGTACCTCTGCAGCAACAGCTGCCTCTGCAGTATATGACATAATAATATG
Solanum melongena mRNA, clone: SmFL06I06, 5'end.
FS070505.1:335-355
ACCTGAAAGCTCTACTGGAAGTTGAGACAC335AAGTACCTCTGCAGCAACAGCAGCTGCTGTACAATGGGAGGGAAATGAGGA
Solanum melongena mRNA, clone: SmFL15M08, 5'end.
FS076882.1:368-388
ACCTGAAAGCTCTACTGGAAGTTGAGACAC368AAGTACCTCTGCAGCAACAGCAGCTGCTGTACAATGGGAGGGAAATGAGGA
Solanum torvum mRNA, clone: TVR19J02, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS115785.1:426-446
ACCTGAAAGCTCTACTGGAAGTTGAGACAC426AAGTACCTCTGCAGCAACAGCAGCTTCTGTACAATGGGAGGGAAATGAGGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGTACCTCTGCAGCAACAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGTACCTCTGCAGCAACAGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.429 | 0.420 | search_plus_done; http://172.18.8.135:50400/match?q=AAGTACCTCTGCAGCAACAGC&k=0&no_gap=0&offset=0&limit=50
0.526 | 0.097 | search_minus_done; http://172.18.8.135:50400/match?q=GCTGTTGCTGCAGAGGTACTT&k=0&no_gap=0&offset=0&limit=46
0.526 | 0.000 | cgi_end;

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