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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 09:43:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Nicotiana benthamiana isotig01508.Nb_flower mRNA sequence.
KA730326.1:14-33
CCCAGTTCACCCC14AAGTCCTTCCACATTGTGCCCCAAAAACACCAACAATGTTACTAGGACCA
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:91701948-91701967
GTGGGAGGAGATGTCACCCCAGTTAACACC91701948AAGTCCTTCCACATTGTGCCCCAAAAAGAACAAGAATGTTACTAGGAAAA
KF8C.110H03F.051216T7 KF8 Nicotiana tabacum cDNA clone KF8C.110H03, mRNA sequence.
EB427579.1:142-161
TGGCCCTACTAACTTTGTTGGTGTTTTTGG142GGCACAATGTGGAAGGACTTGGGGTGAACTGGGGTGATATCTCCTCCCAC
AGN_PNL226af1_b6.trimmed.seq AGN_PNL Nicotiana tabacum cDNA 5', mRNA sequence.
FG197461.1:142-161
TGGCCCTACTAACTTTGTTGGTGTTTTTGG142GGCACAATGTGGAAGGACTTGGGGTGAACTGGGGTGATATCTCCTCCCAC
KS20002G11 KS20 Capsicum annuum cDNA, mRNA sequence.
GD093532.1:153-172
TATTCGCTACAACAGTCTTGTTCTTTTTGG153GGCACAATGTGGAAGGACTTGCTGTTAACTGGGGTGACATCTCCTCCCAC
KS20008C02 KS20 Capsicum annuum cDNA, mRNA sequence.
GD094031.1:182-201
TTTTCCTAGTAACATTCTTGTTCTTTTTGG182GGCACAATGTGGAAGGACTTGGTGTTAACTGGGGTGACATCTCCTCCCAC
KS20012G12 KS20 Capsicum annuum cDNA, mRNA sequence.
GD094458.1:26-45
GCACGAGGATTCTTGTTCTTTTTGG26GGCACAATGTGGAAGGACTTGGTGTTAACTGGGGTGACATCTCCTCCCAC
KS20036B06 KS20 Capsicum annuum cDNA, mRNA sequence.
GD096617.1:182-201
TTTTCCTAGTAACATTCTTGTTCTTTTTGG182GGCACAATGTGGAAGGACTTGGTGTTAACTGGGGTGACATCTCCTCCCAC
TSA: Nicotiana benthamiana isotig02092.Nb_flower mRNA sequence.
KA730905.1:734-753
TGGTCCTAGTAACATTGTTGGTGTTTTTGG734GGCACAATGTGGAAGGACTTGGGGTGAACTGGGGC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:200454692-200454711
TTTTCCTAGTAACATTCTTGTTCTTTTTGG200454692GGCACAATGTGGAAGGACTTGGTGTTAACTGGGGTGACATCTCCTCCCAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGTCCTTCCACATTGTGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGTCCTTCCACATTGTGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.363 | 0.354 | search_plus_done; http://172.18.8.135:50400/match?q=AAGTCCTTCCACATTGTGCC&k=0&no_gap=0&offset=0&limit=50
1.086 | 0.723 | search_minus_done; http://172.18.8.135:50400/match?q=GGCACAATGTGGAAGGACTT&k=0&no_gap=0&offset=0&limit=48
1.091 | 0.005 | cgi_end;

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