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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:44:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Arachis hypogaea Ahy.Unigene50257 mRNA sequence.
JR584377.1:192-211
AAACAAACAACAATGGTGATTGTTTATGGT192AATGTATGTGTGTTGGGCCCACGCATGCAGCAATATGTAGTCCTTGATAT
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:120081679-120081698
TGGTGATTGGTGAAATTGATTGTTTATGGT120081679AATGTATGTGTGTTGGGCCCACGCATGTAGCAATATGTAGCCCTTGATAT
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:126749913-126749932
AAACAAACAACAATGGTGATTGTTTATGGT126749913AATGTATGTGTGTTGGGCCCACGCATGCAGTAATATGTAGTCCTTGATAT
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:117375694-117375713
TGGTGATTGGTGAAATTGATTGTTTATGGT117375694AATGTATGTGTGTTGGGCCCACGCATGTAGCAATATGTAGCCCTTGATAT
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:125980636-125980655
AAACAAACAACAATGGTGATTGTTTATGGT125980636AATGTATGTGTGTTGGGCCCACGCATGCAGTAATATGTAGTCCTTGATAT
VBL6_8_B12_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypogaea cDNA, mRNA sequence.
GO342890.1:751-770
ATATCAAGGACTACATATTGCTGCATGCGT751GGGCCCAACACACATACATTACCATAAACAATCAATTTCACCAATCACCA
TSA: Arachis hypogaea CL1Contig4345.Arhy mRNA sequence.
EZ725329.1:725-744
ATATCAAGGACTACATATTGCTGCATGCGT725GGGCCCAACACACATACATTACCATAAACAATCAATTTCACCAATCACCA
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:141788607-141788626
TCATGATCATCCAATTATTGCTGCATGCGT141788607GGGCCCAACACACATACATTACCATAAACAATCAATTTCACCAATCACCA
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:11524053-11524072
ATATCAAGGACTACATATTGCTGCATGCGT11524053GGGCCCAACACACATACATTACCATAAACAATCAATTTCACCAATCACCA
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:11077316-11077335
ATATCAAGGACTACATATTGCTGCATGCGT11077316GGGCCCAACACACATACATTACCATAAACAATCAATTTCACCAATCACCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AATGTATGTGTGTTGGGCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AATGTATGTGTGTTGGGCCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.181 | 0.172 | search_plus_done; http://172.18.8.135:50400/match?q=AATGTATGTGTGTTGGGCCC&k=0&no_gap=0&offset=0&limit=50
0.374 | 0.192 | search_minus_done; http://172.18.8.135:50400/match?q=GGGCCCAACACACATACATT&k=0&no_gap=0&offset=0&limit=45
0.377 | 0.004 | cgi_end;

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