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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:34:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Dianthus caryophyllus mRNA, clone: CES08D03, 5' end sequence.
FY385198.1:4-23
GCG4AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGAGG
Dianthus caryophyllus mRNA, clone: CFES01A05, 5' end sequence.
FY394170.1:614-633
GGATTTGAGAAAGGTGAGGGAGATTATTCG614AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGAGG
Dianthus caryophyllus mRNA, clone: CFES03N01, 5' end sequence.
FY395236.1:614-633
GGATTTGAGAAAGGTGAGGGAGATTATTCG614AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGAGG
Dianthus caryophyllus mRNA, clone: CFES15_P15, 5' end sequence.
FY399830.1:592-611
GGATTTGAGAAAGGTGAGGGAGATTACTCG592AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGTGG
Dianthus caryophyllus mRNA, clone: CFES17_M14, 5' end sequence.
FY400513.1:588-607
GGATTTGAGAAAGGTGAGGGAGATTACTCG588AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGTGG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.640.C1.
FX297842.1:3-22
CG3AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGAGG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.2140.C1.
FX300736.1:614-633
GGATTTGAGAAAGGTGAGGGAGATTATTCG614AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AATTCAAATGCGAATAGCGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AATTCAAATGCGAATAGCGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.646 | 0.637 | search_plus_done; http://172.18.8.135:50400/match?q=AATTCAAATGCGAATAGCGG&k=0&no_gap=0&offset=0&limit=50
0.746 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=CCGCTATTCGCATTTGAATT&k=0&no_gap=0&offset=0&limit=43
0.746 | 0.000 | cgi_end;

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