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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:56:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Dianthus caryophyllus mRNA, clone: CES11_K21, 5' end sequence.
FY386517.1:215-234
TGCTACCTAATCGCCGCCATCAACTACAAA215GGCTTCACCGTCAAACAATTCCAAGAACTCCGCCGTACACTTCCACCCTC
Dianthus caryophyllus mRNA, clone: CES31K01, 5' end sequence.
FY394025.1:229-248
TGCTACCTAATCGCCGCCATCAACTACAAA229GGCTTCACCGTCAAACAATTCCAAGAACTCCGCCGTACACTTCCACCCTC
TransId-235176 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEX405TV similar to 50S ribosomal protein L10, chloroplast precursor - Nicotiana tabacum (Common tobacco), mRNA sequence.
GT007440.1:307-326
TGCTATCTCATCGCTGGCATTGGCTATAAA307GGCTTCACCGTCAAACAATTTCAAGAACTTAGAAGGCAACTCCCAGAATC
CA00-XX-CB1-084-C04-RF.F Coffea arabica CB1 Coffea arabica cDNA clone CA00-XX-CB1-084-C04-RF, mRNA sequence.
GW428755.1:298-317
TGCTATCTCATCGCTGGCATTGGCTATAAA298GGCTTCACCGTCAAACAATTTCAAGAACTTAGAAGGCAACTCCCAGAATC
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-12.
CP023124.1:22012197-22012216
TGTTACCTCCTCGCCGCAATCAACTACAAA22012197GGCTTCACCGTCAAACAATTCCAGGATCTTCGCAAAACCCTCCCCGAAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AATTGTTTGACGGTGAAGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AATTGTTTGACGGTGAAGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.168 | 0.159 | search_plus_done; http://172.18.8.135:50400/match?q=AATTGTTTGACGGTGAAGCC&k=0&no_gap=0&offset=0&limit=50
0.544 | 0.376 | search_minus_done; http://172.18.8.135:50400/match?q=GGCTTCACCGTCAAACAATT&k=0&no_gap=0&offset=0&limit=50
0.548 | 0.004 | cgi_end;

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